RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 CDIP1Q9H305 208 aa4.95□□□□□ -1.62
VPS8-228ENST00000628962 CLDND1Q9NY35 253 aa4.95□□□□□ -1.62
VPS8-228ENST00000628962 KIAA1522Q9P206 1035 aaPredicted RBP4.95□□□□□ -1.62
VPS8-228ENST00000628962 TNFRSF18Q9Y5U5 241 aa4.95□□□□□ -1.62
VPS8-228ENST00000628962 RAD17O75943 681 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 CPP00450 1065 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 CKMP06732 381 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 C1SP09871 688 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 ZNF888P0CJ79 500 aaPredicted RBP4.94□□□□□ -1.62
VPS8-228ENST00000628962 ACO1P21399 889 aaKnown RBP4.94□□□□□ -1.62
VPS8-228ENST00000628962 HNRNPA0Q13151 305 aaKnown RBP4.94□□□□□ -1.62
VPS8-228ENST00000628962 NCAPHQ15003 741 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 PRSS53Q2L4Q9 553 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 DENND5AQ6IQ26 1287 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 LDLRAD3Q86YD5 345 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 C1orf210Q8IVY1 113 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 TRIM48Q8IWZ4 208 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 PPIL6Q8IXY8 311 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 FAM169BQ8N8A8 192 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 CACTINQ8WUQ7 758 aaKnown RBP4.94□□□□□ -1.62
VPS8-228ENST00000628962 NEU4Q8WWR8 484 aaPredicted RBP4.94□□□□□ -1.62
VPS8-228ENST00000628962 CLEC4DQ8WXI8 215 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 PPP1R14AQ96A00 147 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 ZFP69BQ9UJL9 534 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 PTPN22Q9Y2R2 807 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 SLC30A1Q9Y6M5 507 aa4.94□□□□□ -1.62
VPS8-228ENST00000628962 U2SURPO15042 1029 aaKnown RBP4.93□□□□□ -1.62
VPS8-228ENST00000628962 FBXO21O94952 628 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 USP10Q14694 798 aaKnown RBP4.93□□□□□ -1.62
VPS8-228ENST00000628962 SF1Q15637 639 aaKnown RBP4.93□□□□□ -1.62
VPS8-228ENST00000628962 SKIDA1Q1XH10 827 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 MAMDC4Q6UXC1 1216 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 POLNQ7Z5Q5 900 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 ZNF227Q86WZ6 799 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 DNAJC10Q8IXB1 793 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 IL17DQ8TAD2 202 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 GPRASP2Q96D09 838 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 CCDC140Q96MF4 163 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 PDGFDQ9GZP0 370 aaPredicted RBP4.93□□□□□ -1.62
VPS8-228ENST00000628962 SLC6A20Q9NP91 592 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 IGSF5Q9NSI5 407 aa4.93□□□□□ -1.62
VPS8-228ENST00000628962 KRIT1O00522 736 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 SLC27A2O14975 620 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 ITGAVP06756 1048 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 TCF3P15923 654 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 RAC3P60763 192 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 GRIN1Q05586 938 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 FNDC7Q5VTL7 733 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 METTL16Q86W50 562 aaKnown RBP4.92□□□□□ -1.62
VPS8-228ENST00000628962 STPG3Q8N7X2 389 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 C1orf159Q96HA4 380 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 WDR26Q9H7D7 661 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 ARHGAP20Q9P2F6 1191 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 OAZ3Q9UMX2 235 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 NPFFR2Q9Y5X5 522 aa4.92□□□□□ -1.62
VPS8-228ENST00000628962 IL18BPO95998 194 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 FAHP16930 419 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 GJA8P48165 433 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 GLRBP48167 497 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 GFRA1P56159 465 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 DUSP8Q13202 625 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 RNF151Q2KHN1 245 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 PAN2Q504Q3 1202 aaKnown RBP4.91□□□□□ -1.62
VPS8-228ENST00000628962 PCSK4Q6UW60 755 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 PIP4K2CQ8TBX8 421 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 PLEKHG4BQ96PX9 1271 aa4.91□□□□□ -1.62
VPS8-228ENST00000628962 H0Y858 1186 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 CR2P20023 1033 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 ACRV1P26436 265 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 NASPP49321 788 aaPredicted RBP4.9□□□□□ -1.63
VPS8-228ENST00000628962 PFKPQ01813 784 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 ZNF568Q3ZCX4 644 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 SLC35F1Q5T1Q4 408 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 CD276Q5ZPR3 534 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 TMEM145Q8NBT3 493 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 LARP4BQ92615 738 aaKnown RBP4.9□□□□□ -1.63
VPS8-228ENST00000628962 FAM89AQ96GI7 184 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 CARD11Q9BXL7 1154 aa4.9□□□□□ -1.63
VPS8-228ENST00000628962 SCAMP3O14828 347 aaKnown RBP4.89□□□□□ -1.63
VPS8-228ENST00000628962 CAPNS1P04632 268 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 ENO2P09104 434 aaPredicted RBP4.89□□□□□ -1.63
VPS8-228ENST00000628962 VAMP1P23763 118 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 KCNJ6P48051 423 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 TUBA3CQ13748 450 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 TUBA3EQ6PEY2 450 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 RBM12BQ8IXT5 1001 aaKnown RBP4.89□□□□□ -1.63
VPS8-228ENST00000628962 CPLX3Q8WVH0 158 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 ZG16BQ96DA0 208 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 AGAP2Q99490 1192 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 DPYSL5Q9BPU6 564 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 JAM3Q9BX67 310 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 MMRN2Q9H8L6 949 aa4.89□□□□□ -1.63
VPS8-228ENST00000628962 ZNF839A8K0R7 811 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 MATN2O00339 956 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 PPFIA2O75334 1257 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 RECKO95980 971 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 LTFP02788 710 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 ADH4P08319 380 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 POLD1P28340 1107 aa4.88□□□□□ -1.63
VPS8-228ENST00000628962 TUSC3Q13454 348 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms