RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 KRBA2Q6ZNG9 492 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 ARMCX2Q7L311 632 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 OTUD6AQ7L8S5 288 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 SPATA20Q8TB22 786 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 SEPT9Q9UHD8 586 aaPredicted RBP13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 SLC15A5A6NIM6 579 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 MAP2K5Q13163 448 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 FILIP1Q7Z7B0 1213 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 ANKRD7Q92527 254 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 INTS13Q9NVM9 706 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 RNF186Q9NXI6 227 aa13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 MAP3K20Q9NYL2 800 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-207ENST00000628646 ALDH5A1P51649 535 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 KARSQ15046 597 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 GIMAP8Q8ND71 665 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 BICD1Q96G01 975 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 MXRA8Q9BRK3 442 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 PSAPP07602 524 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 RARBP10826 455 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 TNFAIP2Q03169 654 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 SYCP3Q8IZU3 236 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 SYMPKQ92797 1274 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 FAM20AQ96MK3 541 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 NT5C3AQ9H0P0 336 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 KCNH7Q9NS40 1196 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 NRBP2Q9NSY0 501 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 EXOC1Q9NV70 894 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 STK24Q9Y6E0 443 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 ADAMTS3O15072 1205 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 PRAMEF19Q5SWL8 479 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 SHCBP1Q8NEM2 672 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 IWS1Q96ST2 819 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
SYNGAP1-207ENST00000628646 KIF2AO00139 706 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 ELNP15502 786 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 KCNV1Q6PIU1 500 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 DNERQ8NFT8 737 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 TRIM47Q96LD4 638 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 PTPN18Q99952 460 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 JPH1Q9HDC5 661 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 DISC1Q9NRI5 854 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 IMPACTQ9P2X3 320 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 ZNF215Q9UL58 517 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 A0A087X0B3 334 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 WDR64B1ANS9 1081 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 LONP1P36776 959 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 KRT76Q01546 638 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 GNASQ5JWF2 1037 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 GPAT2Q6NUI2 795 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 USP49Q70CQ1 688 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 C16orf45Q96MC5 204 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 SLC9A2Q9UBY0 812 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 FAM184BQ9ULE4 1060 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 ACTN4O43707 911 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 PGM5Q15124 567 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 DAGLBQ8NCG7 672 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 TINF2Q9BSI4 451 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 TCHPQ9BT92 498 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 IFNKQ9P0W0 207 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 SLC45A1Q9Y2W3 748 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 PCDHA5Q9Y5H7 936 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 KDM3AQ9Y4C1 1321 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 PRR29P0C7W0 189 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 SREBF1P36956 1147 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 DNM2P50570 870 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 E4F1Q66K89 784 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 SWSAP1Q6NVH7 229 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 CYP2W1Q8TAV3 490 aa13.84□□□□□ -0.19
SYNGAP1-207ENST00000628646 RASSF10A6NK89 507 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 MEIS2O14770 477 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 MTERF2Q49AM1 385 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 BANK1Q8NDB2 785 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 TMX1Q9H3N1 280 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 GH1P01241 217 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 SKILP12757 684 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 SRPRBQ9Y5M8 271 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 XRRA1Q6P2D8 792 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 MTERF4Q7Z6M4 381 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 PCMTD1Q96MG8 357 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 ABHD16BQ9H3Z7 469 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 GABBR1Q9UBS5 961 aa13.83□□□□□ -0.2
SYNGAP1-207ENST00000628646 PASKQ96RG2 1323 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 ARP10275 920 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 POLGP54098 1239 aaPredicted RBP13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 CCAR2Q8N163 923 aaKnown RBP13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 MAGEC2Q9UBF1 373 aaPredicted RBP13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 USO1O60763 962 aaKnown RBP13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 STXBP4Q6ZWJ1 553 aa13.82□□□□□ -0.2
SYNGAP1-207ENST00000628646 EPSTI1Q96J88 318 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms