RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 MICALL1Q8N3F8 863 aa29.34■■■□□ 2.29
TCF4-259ENST00000627568 JAKMIP1Q96N16 626 aaKnown RBP29.34■■■□□ 2.29
TCF4-259ENST00000627568 GLT8D2Q9H1C3 349 aa29.34■■■□□ 2.29
TCF4-259ENST00000627568 THEGQ9P2T0 379 aa29.34■■■□□ 2.29
TCF4-259ENST00000627568 VCANP13611 3396 aa29.33■■■□□ 2.29
TCF4-259ENST00000627568 MICAL3Q7RTP6 2002 aa29.33■■■□□ 2.29
TCF4-259ENST00000627568 CTSHP09668 335 aa29.33■■■□□ 2.29
TCF4-259ENST00000627568 METAP2P50579 478 aaKnown RBP eCLIP29.33■■■□□ 2.29
TCF4-259ENST00000627568 TCTN1Q2MV58 587 aa29.33■■■□□ 2.29
TCF4-259ENST00000627568 LMBR1Q8WVP7 490 aa29.33■■■□□ 2.29
TCF4-259ENST00000627568 ARNTL2Q8WYA1 636 aa29.33■■■□□ 2.29
TCF4-259ENST00000627568 BARHL2Q9NY43 387 aa29.33■■■□□ 2.29
TCF4-259ENST00000627568 NRCAMQ92823 1304 aa29.33■■■□□ 2.29
TCF4-259ENST00000627568 PRRC2BQ5JSZ5 2229 aaKnown RBP29.32■■■□□ 2.28
TCF4-259ENST00000627568 STXBP3O00186 592 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 REC8O95072 547 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 HSPA4P34932 840 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 TYW1BQ6NUM6 668 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 BLOC1S2Q6QNY1 142 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 TMCO2Q7Z6W1 182 aaPredicted RBP29.32■■■□□ 2.28
TCF4-259ENST00000627568 GLG1Q92896 1179 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 KCNB2Q92953 911 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 TSPYL2Q9H2G4 693 aaPredicted RBP29.32■■■□□ 2.28
TCF4-259ENST00000627568 PRDM6Q9NQX0 595 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 ERAP1Q9NZ08 941 aa29.32■■■□□ 2.28
TCF4-259ENST00000627568 SMCO2A6NFE2 343 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 GJB5O95377 273 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 CPA1P15085 419 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 CDC27P30260 824 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 AP3B2Q13367 1082 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 TJAP1Q5JTD0 557 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 DBF4BQ8NFT6 615 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 SEPT8Q92599 483 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 MXRA8Q9BRK3 442 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 ANO3Q9BYT9 981 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 JPH1Q9HDC5 661 aaPredicted RBP29.31■■■□□ 2.28
TCF4-259ENST00000627568 TTC28Q96AY4 2481 aa29.31■■■□□ 2.28
TCF4-259ENST00000627568 ARHGEF15O94989 841 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 APOBRQ0VD83 1088 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 PLEKHG4Q58EX7 1191 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 Q6ZUG5 572 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 BRF1Q92994 677 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 PGBD1Q96JS3 809 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 RAD9AQ99638 391 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 SMARCAD1Q9H4L7 1026 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 KCNH7Q9NS40 1196 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 FAM217BQ9NTX9 383 aaPredicted RBP29.3■■■□□ 2.28
TCF4-259ENST00000627568 SNX14Q9Y5W7 946 aa29.3■■■□□ 2.28
TCF4-259ENST00000627568 GSTTP1A0A1W2PQM5 241 aa29.29■■■□□ 2.28
TCF4-259ENST00000627568 RFXAPO00287 272 aa29.29■■■□□ 2.28
TCF4-259ENST00000627568 AMHP03971 560 aa29.29■■■□□ 2.28
TCF4-259ENST00000627568 MARK3P27448 753 aa29.29■■■□□ 2.28
TCF4-259ENST00000627568 ADAM17P78536 824 aa29.29■■■□□ 2.28
TCF4-259ENST00000627568 PPFIA1Q13136 1202 aa29.29■■■□□ 2.28
TCF4-259ENST00000627568 ATXN2LQ8WWM7 1075 aaKnown RBP29.29■■■□□ 2.28
TCF4-259ENST00000627568 SDF4Q9BRK5 362 aa29.29■■■□□ 2.28
TCF4-259ENST00000627568 SLC9A2Q9UBY0 812 aa29.29■■■□□ 2.28
TCF4-259ENST00000627568 LCHNA4D1U4 455 aa29.28■■■□□ 2.28
TCF4-259ENST00000627568 PSMA5P28066 241 aa29.28■■■□□ 2.28
TCF4-259ENST00000627568 FAM117BQ6P1L5 589 aa29.28■■■□□ 2.28
TCF4-259ENST00000627568 TAF2Q6P1X5 1199 aa29.28■■■□□ 2.28
TCF4-259ENST00000627568 MYOCDQ8IZQ8 938 aa29.28■■■□□ 2.28
TCF4-259ENST00000627568 AZI2Q9H6S1 392 aa29.28■■■□□ 2.28
TCF4-259ENST00000627568 EPOPA6NHQ4 379 aa29.27■■■□□ 2.28
TCF4-259ENST00000627568 ADD1P35611 737 aaKnown RBP29.27■■■□□ 2.28
TCF4-259ENST00000627568 PFKFB3Q16875 520 aaPredicted RBP29.27■■■□□ 2.28
TCF4-259ENST00000627568 CEP55Q53EZ4 464 aa29.27■■■□□ 2.28
TCF4-259ENST00000627568 SCG2P13521 617 aa29.26■■■□□ 2.27
TCF4-259ENST00000627568 POU3F3P20264 500 aaPredicted RBP29.26■■■□□ 2.27
TCF4-259ENST00000627568 ZNF76P36508 570 aa29.26■■■□□ 2.27
TCF4-259ENST00000627568 SREBF1P36956 1147 aa29.26■■■□□ 2.27
TCF4-259ENST00000627568 GRIK4Q16099 956 aa29.26■■■□□ 2.27
TCF4-259ENST00000627568 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.26■■■□□ 2.27
TCF4-259ENST00000627568 RSPH3Q86UC2 560 aa29.26■■■□□ 2.27
TCF4-259ENST00000627568 CCDC12Q8WUD4 166 aaPredicted RBP29.26■■■□□ 2.27
TCF4-259ENST00000627568 TUBE1Q9UJT0 475 aa29.26■■■□□ 2.27
TCF4-259ENST00000627568 MTCH2Q9Y6C9 303 aa29.26■■■□□ 2.27
TCF4-259ENST00000627568 NFASCO94856 1347 aa29.25■■■□□ 2.27
TCF4-259ENST00000627568 COL4A4P53420 1690 aaPredicted RBP29.25■■■□□ 2.27
TCF4-259ENST00000627568 NEFLP07196 543 aa29.25■■■□□ 2.27
TCF4-259ENST00000627568 RPS6KB1P23443 525 aa29.25■■■□□ 2.27
TCF4-259ENST00000627568 SKIV2LQ15477 1246 aaKnown RBP29.25■■■□□ 2.27
TCF4-259ENST00000627568 CYP2W1Q8TAV3 490 aa29.25■■■□□ 2.27
TCF4-259ENST00000627568 APBB2Q92870 758 aa29.25■■■□□ 2.27
TCF4-259ENST00000627568 TNPO1Q92973 898 aaKnown RBP29.25■■■□□ 2.27
TCF4-259ENST00000627568 TMEM260Q9NX78 707 aa29.25■■■□□ 2.27
TCF4-259ENST00000627568 INSL6Q9Y581 213 aa29.25■■■□□ 2.27
TCF4-259ENST00000627568 NID2Q14112 1375 aa29.25■■■□□ 2.27
TCF4-259ENST00000627568 CLK2P49760 499 aaKnown RBP29.24■■■□□ 2.27
TCF4-259ENST00000627568 MRPS5P82675 430 aaKnown RBP29.24■■■□□ 2.27
TCF4-259ENST00000627568 AKAP17AQ02040 695 aaKnown RBP29.24■■■□□ 2.27
TCF4-259ENST00000627568 FAM26DQ5JW98 314 aa29.24■■■□□ 2.27
TCF4-259ENST00000627568 IL27Q8NEV9 243 aa29.24■■■□□ 2.27
TCF4-259ENST00000627568 TGS1Q96RS0 853 aaKnown RBP29.24■■■□□ 2.27
TCF4-259ENST00000627568 GRB10Q13322 594 aa29.23■■■□□ 2.27
TCF4-259ENST00000627568 MKRN4PQ13434 485 aaPredicted RBP29.23■■■□□ 2.27
TCF4-259ENST00000627568 RUFY4Q6ZNE9 571 aa29.23■■■□□ 2.27
TCF4-259ENST00000627568 SPRED2Q7Z698 418 aa29.23■■■□□ 2.27
TCF4-259ENST00000627568 RPAINQ86UA6 219 aa29.23■■■□□ 2.27
TCF4-259ENST00000627568 FBXL16Q8N461 479 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms