RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CYP4A11Q02928 519 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 VWA3BQ502W6 1294 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 FIGNQ5HY92 759 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 NOL9Q5SY16 702 aaKnown RBP24.46■■□□□ 1.51
PNKP-220ENST00000627232 PCNX4Q63HM2 1172 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 RAD9BQ6WBX8 426 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 ARHGAP27Q6ZUM4 889 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 OR8K1Q8NGG5 319 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 NEK9Q8TD19 979 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 DNAJC7Q99615 494 aa24.46■■□□□ 1.51
PNKP-220ENST00000627232 TTC26A0AVF1 554 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 SLITRK3O94933 977 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 DGKZQ13574 1117 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 SYT10Q6XYQ8 523 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 ZC3H3Q8IXZ2 948 aaKnown RBP24.45■■□□□ 1.51
PNKP-220ENST00000627232 SYTL5Q8TDW5 730 aaPredicted RBP24.45■■□□□ 1.51
PNKP-220ENST00000627232 KLRG1Q96E93 195 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 DYDC2Q96IM9 177 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 REEP2Q9BRK0 252 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 BHMT2Q9H2M3 363 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 GGA3Q9NZ52 723 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 RGL1Q9NZL6 768 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.45■■□□□ 1.51
PNKP-220ENST00000627232 UBIAD1Q9Y5Z9 338 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 ADGRG1Q9Y653 693 aa24.45■■□□□ 1.51
PNKP-220ENST00000627232 RNF225M0QZC1 329 aaPredicted RBP24.45■■□□□ 1.5
PNKP-220ENST00000627232 IPO5O00410 1097 aaKnown RBP24.45■■□□□ 1.5
PNKP-220ENST00000627232 VWA5AO00534 786 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 GNA14O95837 355 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 GAP43P17677 238 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 SUPT20HL1Q3ZLR7 823 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 MUM1L1Q5H9M0 696 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 SCFD1Q8WVM8 642 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 ZKSCAN4Q969J2 545 aaPredicted RBP24.45■■□□□ 1.5
PNKP-220ENST00000627232 TTYH3Q9C0H2 523 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 KCTD10Q9H3F6 313 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 UNC45AQ9H3U1 944 aa24.45■■□□□ 1.5
PNKP-220ENST00000627232 COL11A1P12107 1806 aaPredicted RBP24.44■■□□□ 1.5
PNKP-220ENST00000627232 A0A1W2PQJ5 194 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 OAZ1P54368 228 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 CACNB1Q02641 598 aaPredicted RBP24.44■■□□□ 1.5
PNKP-220ENST00000627232 CTTNQ14247 550 aaKnown RBP24.44■■□□□ 1.5
PNKP-220ENST00000627232 MTF1Q14872 753 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 SYCP1Q15431 976 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 EDRF1Q3B7T1 1238 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 NACC1Q96RE7 527 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 FGFBP2Q9BYJ0 223 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 NDST4Q9H3R1 872 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 TBC1D7Q9P0N9 293 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 COL4A3BPQ9Y5P4 624 aa24.44■■□□□ 1.5
PNKP-220ENST00000627232 SSC5DA1L4H1 1573 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 ITGB5P18084 799 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 MARSP56192 900 aaKnown RBP24.43■■□□□ 1.5
PNKP-220ENST00000627232 ERVK-24P63145 666 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 TSR1Q2NL82 804 aaKnown RBP24.43■■□□□ 1.5
PNKP-220ENST00000627232 EPM2AIP1Q7L775 607 aaPredicted RBP24.43■■□□□ 1.5
PNKP-220ENST00000627232 TPH2Q8IWU9 490 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 EEF2KMTQ96G04 330 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 TRERF1Q96PN7 1200 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 JADE2Q9NQC1 790 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 ADAMTS5Q9UNA0 930 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 ZHX2Q9Y6X8 837 aa24.43■■□□□ 1.5
PNKP-220ENST00000627232 TRAF5O00463 557 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 CHMP2AO43633 222 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 TBCAO75347 108 aaKnown RBP24.42■■□□□ 1.5
PNKP-220ENST00000627232 EPS15P42566 896 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 HIRAP54198 1017 aaPredicted RBP24.42■■□□□ 1.5
PNKP-220ENST00000627232 RAD51AP2Q09MP3 1159 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 RINT1Q6NUQ1 792 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 SFR1Q86XK3 245 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 ATG4CQ96DT6 458 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 RUSC1Q9BVN2 902 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 MAF1Q9H063 256 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 ZHX3Q9H4I2 956 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 L2HGDHQ9H9P8 463 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 SPON1Q9HCB6 807 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 KCND2Q9NZV8 630 aa24.42■■□□□ 1.5
PNKP-220ENST00000627232 POLR2AP24928 1970 aaKnown RBP24.42■■□□□ 1.5
PNKP-220ENST00000627232 TRIM21P19474 475 aaKnown RBP24.41■■□□□ 1.5
PNKP-220ENST00000627232 DSG3P32926 999 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 ZBED6P86452 979 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 BMT2Q1RMZ1 405 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 TKFCQ3LXA3 575 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 PRAMEF18Q5VWM3 479 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 REPS2Q8NFH8 660 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 DESI2Q9BSY9 194 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 OLFML3Q9NRN5 406 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 KCNH7Q9NS40 1196 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 WDR90Q96KV7 1748 aa24.41■■□□□ 1.5
PNKP-220ENST00000627232 RASSF10A6NK89 507 aa24.4■■□□□ 1.5
PNKP-220ENST00000627232 RPS6P62753 249 aaKnown RBP24.4■■□□□ 1.5
PNKP-220ENST00000627232 XRRA1Q6P2D8 792 aa24.4■■□□□ 1.5
PNKP-220ENST00000627232 RNF207Q6ZRF8 634 aa24.4■■□□□ 1.5
PNKP-220ENST00000627232 C1orf186Q6ZWK4 172 aa24.4■■□□□ 1.5
PNKP-220ENST00000627232 IL31RAQ8NI17 732 aa24.4■■□□□ 1.5
PNKP-220ENST00000627232 TAAR1Q96RJ0 339 aa24.4■■□□□ 1.5
PNKP-220ENST00000627232 AGO4Q9HCK5 861 aaKnown RBP24.4■■□□□ 1.5
PNKP-220ENST00000627232 HOMER2Q9NSB8 354 aa24.4■■□□□ 1.5
PNKP-220ENST00000627232 DNAI1Q9UI46 699 aa24.4■■□□□ 1.5
PNKP-220ENST00000627232 TRAF3IP3Q9Y228 551 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms