RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 PHF20Q9BVI0 1012 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 ANAPC5Q9UJX4 755 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 TFR2Q9UP52 801 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 NEXMIFQ5QGS0 1516 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 ARHGAP42A6NI28 874 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 CLIC2O15247 247 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 CARSP49589 748 aaKnown RBP19.19■□□□□ 0.66
FARP1-242ENST00000627049 SNX1Q13596 522 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 CYP4F22Q6NT55 531 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 LRIG3Q6UXM1 1119 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 SENP2Q9HC62 589 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 ZBTB1Q9Y2K1 713 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 USP32Q8NFA0 1604 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 LRRN2O75325 713 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 PLA2G4BP0C869 781 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 ZNF18P17022 549 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 VTI1AQ96AJ9 217 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 RNPC3Q96LT9 517 aaKnown RBP19.19■□□□□ 0.66
FARP1-242ENST00000627049 ZNF148Q9UQR1 794 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 RABGAP1Q9Y3P9 1069 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 CDC42BPGQ6DT37 1551 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 CYP27B1O15528 508 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 ACSL3O95573 720 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 LLGL1Q15334 1064 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 SMARCAL1Q9NZC9 954 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 ANAPC4Q9UJX5 808 aa19.19■□□□□ 0.66
FARP1-242ENST00000627049 GAS7O60861 476 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 POLE2P56282 527 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 ITIH3Q06033 890 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 PTGISQ16647 500 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 SH2D4BQ5SQS7 431 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 THOC1Q96FV9 657 aaKnown RBP19.18■□□□□ 0.66
FARP1-242ENST00000627049 KAZALD1Q96I82 304 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 PITPNM3Q9BZ71 974 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 AZI2Q9H6S1 392 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
FARP1-242ENST00000627049 DAPK3O43293 454 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 FCER1AP12319 257 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 TMED2Q15363 201 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 MAP7D1Q3KQU3 841 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 PACS2Q86VP3 889 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 CTAGE3PQ8IX95 158 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 CYFIP2Q96F07 1278 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 YIPF3Q9GZM5 350 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 hCG_1984214I3L0E3 225 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 CFBP00751 764 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 IRX4P78413 519 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 HDLBPQ00341 1268 aaKnown RBP19.18■□□□□ 0.66
FARP1-242ENST00000627049 ZNF713Q8N859 430 aaPredicted RBP19.18■□□□□ 0.66
FARP1-242ENST00000627049 IWS1Q96ST2 819 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 DDX39AO00148 427 aaKnown RBP19.18■□□□□ 0.66
FARP1-242ENST00000627049 MAPK13O15264 365 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 TBX2Q13207 712 aaPredicted RBP19.18■□□□□ 0.66
FARP1-242ENST00000627049 CAPRIN2Q6IMN6 1127 aaKnown RBP19.18■□□□□ 0.66
FARP1-242ENST00000627049 RAB20Q9NX57 234 aa19.18■□□□□ 0.66
FARP1-242ENST00000627049 NOC2LQ9Y3T9 749 aaKnown RBP19.18■□□□□ 0.66
FARP1-242ENST00000627049 SSU72P8A0A1W2PR75 194 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 BACH1O14867 736 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 PAPD7Q5XG87 772 aaKnown RBP19.17■□□□□ 0.66
FARP1-242ENST00000627049 SLC40A1Q9NP59 571 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 ZNF449Q6P9G9 518 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 USP17L2Q6R6M4 530 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 SEC16BQ96JE7 1060 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 AMACRQ9UHK6 382 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 GGA1Q9UJY5 639 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 RHOBTB3O94955 611 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 USP17L8P0C7I0 530 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 DPH6Q7L8W6 267 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 PDCD7Q8N8D1 485 aaKnown RBP19.17■□□□□ 0.66
FARP1-242ENST00000627049 ZNF653Q96CK0 615 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 CARD10Q9BWT7 1032 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 VCX3AQ9NNX9 186 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 SNAP23O00161 211 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 CD44P16070 742 aaKnown RBP19.17■□□□□ 0.66
FARP1-242ENST00000627049 IL6STP40189 918 aaPredicted RBP19.17■□□□□ 0.66
FARP1-242ENST00000627049 ASPRV1Q53RT3 343 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 COA7Q96BR5 231 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 CCSER1Q9C0I3 900 aa19.17■□□□□ 0.66
FARP1-242ENST00000627049 KCNH2Q12809 1159 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 FOXR1Q6PIV2 292 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 RHOT2Q8IXI1 618 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 CCDC24Q8N4L8 307 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 TRIM9Q9C026 710 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 NOL3O60936 208 aaKnown RBP19.16■□□□□ 0.66
FARP1-242ENST00000627049 ATF7P17544 494 aaPredicted RBP19.16■□□□□ 0.66
FARP1-242ENST00000627049 LMNB2Q03252 620 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 BATF3Q9NR55 127 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 PCDHA1Q9Y5I3 950 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 BYSLQ13895 437 aaKnown RBP19.16■□□□□ 0.66
FARP1-242ENST00000627049 PDS5AQ29RF7 1337 aaKnown RBP19.16■□□□□ 0.66
FARP1-242ENST00000627049 ODR4Q5SWX8 454 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 ILDR1Q86SU0 546 aaPredicted RBP19.16■□□□□ 0.66
FARP1-242ENST00000627049 USP17L3A6NCW0 530 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 USP17L4A6NCW7 530 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 DPP8Q6V1X1 898 aaPredicted RBP19.16■□□□□ 0.66
FARP1-242ENST00000627049 USP17L1Q7RTZ2 530 aa19.16■□□□□ 0.66
FARP1-242ENST00000627049 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.16■□□□□ 0.66
FARP1-242ENST00000627049 FRMPD1Q5SYB0 1578 aa19.15■□□□□ 0.66
FARP1-242ENST00000627049 ATP5HO75947 161 aa19.15■□□□□ 0.66
FARP1-242ENST00000627049 GAP43P17677 238 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms