RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 UTP14CQ5TAP6 766 aaKnown RBP21.57■■□□□ 1.04
SQSTM1-216ENST00000626660 SMAP1Q8IYB5 467 aaPredicted RBP21.57■■□□□ 1.04
SQSTM1-216ENST00000626660 GJA10Q969M2 543 aa21.57■■□□□ 1.04
SQSTM1-216ENST00000626660 KATNAL1Q9BW62 490 aa21.57■■□□□ 1.04
SQSTM1-216ENST00000626660 BRCA2P51587 3418 aa21.57■■□□□ 1.04
SQSTM1-216ENST00000626660 SCN10AQ9Y5Y9 1956 aa21.57■■□□□ 1.04
SQSTM1-216ENST00000626660 A0A0U1RQG5 324 aaPredicted RBP21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 GSTTP1A0A1W2PQM5 241 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 WDR64B1ANS9 1081 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 CCNE2O96020 404 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 LGALS2P05162 132 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 ZSCAN22P10073 491 aaPredicted RBP21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 JAK3P52333 1124 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 MIS18BP1Q6P0N0 1132 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 HAS1Q92839 578 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 HTATIP2Q9BUP3 242 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 AZI2Q9H6S1 392 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 ZNF215Q9UL58 517 aaPredicted RBP21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 SAMM50Q9Y512 469 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 PCDHB6Q9Y5E3 794 aa21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 MYH9P35579 1960 aaKnown RBP21.56■■□□□ 1.04
SQSTM1-216ENST00000626660 BACH1O14867 736 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 CHMP2AO43633 222 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 OR52Z1P0C646 297 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 SFNP31947 248 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 ATN1P54259 1190 aaPredicted RBP21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 CHMP4BP1P59074 171 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 HABP4Q5JVS0 413 aaKnown RBP21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 FOXD4L5Q5VV16 416 aaPredicted RBP21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 MIER3Q7Z3K6 550 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 FOXD4L4Q8WXT5 416 aaPredicted RBP21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 SEZ6LQ9BYH1 1024 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 UNC45AQ9H3U1 944 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 TELO2Q9Y4R8 837 aa21.55■■□□□ 1.04
SQSTM1-216ENST00000626660 LAD1O00515 517 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 ATG7O95352 703 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 F2P00734 622 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 PSAPP07602 524 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 SUPT20HL2P0C7V6 817 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 TXKP42681 527 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 PSEN2P49810 448 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 FAM160B1Q5W0V3 765 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 ABHD15Q6UXT9 468 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 SLC39A5Q6ZMH5 540 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 RDM1Q8NG50 284 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 GLG1Q92896 1179 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 MTMR9Q96QG7 549 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 TMEM60Q9H2L4 133 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 SMARCAD1Q9H4L7 1026 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 DISC1Q9NRI5 854 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 PCDHA12Q9UN75 941 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 PCDHA10Q9Y5I2 948 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 EMSYQ7Z589 1322 aa21.54■■□□□ 1.04
SQSTM1-216ENST00000626660 H3BRB1 525 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 LGR5O75473 907 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 BMP15O95972 392 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 F13A1P00488 732 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 PSMC6P62333 389 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 PTGDRQ13258 359 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 PPP2R5CQ13362 524 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 ITGA7Q13683 1181 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 MFSD10Q14728 455 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 TMEM266Q2M3C6 531 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 KAT2BQ92831 832 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 C16orf70Q9BSU1 422 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 TUT1Q9H6E5 874 aaKnown RBP21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 TTC12Q9H892 705 aaPredicted RBP21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 TSHZ2Q9NRE2 1034 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 CEP131Q9UPN4 1083 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 KAT6AQ92794 2004 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 WDR81Q562E7 1941 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 MYH15Q9Y2K3 1946 aa21.53■■□□□ 1.04
SQSTM1-216ENST00000626660 ARVCFO00192 962 aa21.52■■□□□ 1.04
SQSTM1-216ENST00000626660 KIAA0753Q2KHM9 967 aa21.52■■□□□ 1.04
SQSTM1-216ENST00000626660 NBPF20Q3BBV1 942 aa21.52■■□□□ 1.04
SQSTM1-216ENST00000626660 TRIM50Q86XT4 487 aa21.52■■□□□ 1.04
SQSTM1-216ENST00000626660 ZNF302Q9NR11 478 aa21.52■■□□□ 1.04
SQSTM1-216ENST00000626660 ERAP1Q9NZ08 941 aa21.52■■□□□ 1.04
SQSTM1-216ENST00000626660 VAV3Q9UKW4 847 aa21.52■■□□□ 1.04
SQSTM1-216ENST00000626660 RBM19Q9Y4C8 960 aaKnown RBP21.52■■□□□ 1.04
SQSTM1-216ENST00000626660 STAT5BP51692 787 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 PKP1Q13835 747 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 FAM47CQ5HY64 1035 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 C1orf53Q5VUE5 145 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 NCAPH2Q6IBW4 605 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 SWSAP1Q6NVH7 229 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 B3GNT9Q6UX72 402 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 PLPPR4Q7Z2D5 763 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 C7orf31Q8N865 590 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 C4orf32Q8N8J7 132 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 ZNF396Q96N95 335 aaPredicted RBP21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 MROH7Q68CQ1 1323 aa21.51■■□□□ 1.03
SQSTM1-216ENST00000626660 IGKV6D-21A0A0A0MT36 114 aa21.5■■□□□ 1.03
SQSTM1-216ENST00000626660 HAS3O00219 553 aa21.5■■□□□ 1.03
SQSTM1-216ENST00000626660 BRD1O95696 1058 aa21.5■■□□□ 1.03
SQSTM1-216ENST00000626660 PRPHP41219 470 aa21.5■■□□□ 1.03
SQSTM1-216ENST00000626660 SLC26A2P50443 739 aa21.5■■□□□ 1.03
SQSTM1-216ENST00000626660 RTP1P59025 263 aa21.5■■□□□ 1.03
SQSTM1-216ENST00000626660 ATP2C1P98194 919 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms