RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 KRIT1O00522 736 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 GABRDO14764 452 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 HGSO14964 777 aaPredicted RBP3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 C4BPAP04003 597 aaKnown RBP3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 S100BP04271 92 aaPredicted RBP3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 CYBBP04839 570 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 APPP05067 770 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 TMEM253P0C7T8 217 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 PTPN1P18031 435 aaKnown RBP3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 IARSP41252 1262 aaKnown RBP3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 KPNA1P52294 538 aaPredicted RBP3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 KIF11P52732 1056 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 CATSPEREQ5SY80 951 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 ARTNQ5T4W7 220 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 ADGRF1Q5T601 910 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 CYP4F22Q6NT55 531 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 HDGFL2Q7Z4V5 671 aaPredicted RBP3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 CMIPQ8IY22 773 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 ABHD4Q8TB40 342 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 CLEC4DQ8WXI8 215 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 JDP2Q8WYK2 163 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 SMOC1Q9H4F8 434 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 TRHDEQ9UKU6 1024 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 G3BP2Q9UN86 482 aaKnown RBP3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 SPO11Q9Y5K1 396 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 ATP23Q9Y6H3 246 aa3.81□□□□□ -1.8
SCARNA4-202ENST00000625402 H7C1D1 291 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 K7ESF4 209 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 FZD9O00144 591 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 BUB1BO60566 1050 aaPredicted RBP3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 CLASP2O75122 1294 aaKnown RBP3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 ALDH1L1O75891 902 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 PAPLNO95428 1278 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 MMEP08473 750 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 CPEP16870 476 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 FBLN1P23142 703 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 SMAD3P84022 425 aaKnown RBP3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 PRR5P85299 388 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 GRIN1Q05586 938 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 MCL1Q07820 350 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 SART3Q15020 963 aaKnown RBP3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 SNX17Q15036 470 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 TTF1Q15361 905 aaPredicted RBP3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 TERF2Q15554 542 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 SMAD2Q15796 467 aaKnown RBP3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 DDB1Q16531 1140 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 ARHGAP44Q17R89 818 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 ABCB5Q2M3G0 1257 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 BROXQ5VW32 411 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 PAQR3Q6TCH7 311 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 MILR1Q7Z6M3 343 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 CABP7Q86V35 215 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 KIRREL1Q96J84 757 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 PUS7LQ9H0K6 701 aaKnown RBP3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 AP5M1Q9H0R1 490 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 SEMA4AQ9H3S1 761 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 PCIF1Q9H4Z3 704 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 ZFP64Q9NPA5 681 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 KCNH7Q9NS40 1196 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 RBPJLQ9UBG7 517 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 WASF3Q9UPY6 502 aa3.8□□□□□ -1.8
SCARNA4-202ENST00000625402 TNKSO95271 1327 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 A0A1W2PQJ5 194 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 PRAMEF25A6NGN4 478 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 F8W031 263 aaPredicted RBP3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 MC4RP32245 332 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 ARL4AP40617 200 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 ITKQ08881 620 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 TMEM132BQ14DG7 1078 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 RAB3GAP1Q15042 981 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 CHRNA2Q15822 529 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 INAVAQ3KP66 663 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 SYDE2Q5VT97 1194 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 IQSEC1Q6DN90 963 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 PROSER1Q86XN7 944 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 MIB1Q86YT6 1006 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 Q8N3U1 123 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 TTLL11Q8NHH1 800 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 PHOSPHO1Q8TCT1 267 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 TSPAN17Q96FV3 270 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 C16orf92Q96LL3 132 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 SYT3Q9BQG1 590 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 YIPF4Q9BSR8 244 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 PDGFDQ9GZP0 370 aaPredicted RBP3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 TOPORSQ9NS56 1045 aaPredicted RBP3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 TOMM22Q9NS69 142 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 RIC8BQ9NVN3 520 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 C14orf119Q9NWQ9 140 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 KLHL14Q9P2G3 628 aa3.79□□□□□ -1.8
SCARNA4-202ENST00000625402 MARCH6O60337 910 aa3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 HIP1RO75146 1068 aa3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 MT-CO1P00395 513 aa3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 SDHAP31040 664 aa3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 STAT5AP42229 794 aa3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 AFMP43652 599 aa3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 NEK2P51955 445 aa3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 YBX1P67809 324 aaKnown RBP3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 PHC1P78364 1004 aa3.78□□□□□ -1.8
SCARNA4-202ENST00000625402 RBM10P98175 930 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms