RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CC2D2BQ6DHV5 1058 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
GABRB3-215ENST00000622697 LGSNQ5TDP6 509 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 ZBTB8OSQ8IWT0 167 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 P3H4Q92791 437 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 CNKSR1Q969H4 720 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 PACSIN2Q9UNF0 486 aaPredicted RBP17.54■□□□□ 0.4
GABRB3-215ENST00000622697 GH2P01242 217 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 STAT3P40763 770 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 SFR1Q86XK3 245 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 HOOK2Q96ED9 719 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
GABRB3-215ENST00000622697 CD209Q9NNX6 404 aa17.54■□□□□ 0.4
GABRB3-215ENST00000622697 LMTK2Q8IWU2 1503 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 WDR11Q9BZH6 1224 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 CD2APQ9Y5K6 639 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 TNNC2P02585 160 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 AS3MTQ9HBK9 375 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 UBE2Q2LH0YL09 131 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 HADHQ16836 314 aaKnown RBP17.53■□□□□ 0.4
GABRB3-215ENST00000622697 RAB3IL1Q8TBN0 382 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 CTNND1O60716 968 aaKnown RBP17.53■□□□□ 0.4
GABRB3-215ENST00000622697 EIF2AK2P19525 551 aaKnown RBP17.53■□□□□ 0.4
GABRB3-215ENST00000622697 ATP2C1P98194 919 aaPredicted RBP17.53■□□□□ 0.4
GABRB3-215ENST00000622697 GADL1Q6ZQY3 521 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 RAD54LQ92698 747 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 BARHL2Q9NY43 387 aa17.53■□□□□ 0.4
GABRB3-215ENST00000622697 GGCXP38435 758 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 GRM4Q14833 912 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 PSMD6Q15008 389 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 SMC1BQ8NDV3 1235 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 SYNJ2BP-COX16A0A087WUM0 186 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 SGK1O00141 431 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 FGGP02679 453 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 DYNLT1P63172 113 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 COASYQ13057 564 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 SEPT14Q6ZU15 432 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 CHP1Q99653 195 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 COX16Q9P0S2 106 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 PCDHA6Q9UN73 950 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 PCDHA8Q9Y5H6 950 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 MRFAP1Q9Y605 127 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 ATP1A1P05023 1023 aaKnown RBP17.52■□□□□ 0.4
GABRB3-215ENST00000622697 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.4
GABRB3-215ENST00000622697 AOC3Q16853 763 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 TRIM68Q6AZZ1 485 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 LMNTD2Q8IXW0 634 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 PBKQ96KB5 322 aa17.52■□□□□ 0.4
GABRB3-215ENST00000622697 TYW1Q9NV66 732 aaKnown RBP17.52■□□□□ 0.4
GABRB3-215ENST00000622697 GOLGA8SH3BPF8 625 aa17.52■□□□□ 0.39
GABRB3-215ENST00000622697 TROVE2P10155 538 aaKnown RBP eCLIP17.52■□□□□ 0.39
GABRB3-215ENST00000622697 GRIN1Q05586 938 aa17.52■□□□□ 0.39
GABRB3-215ENST00000622697 ZBTB5O15062 677 aa17.52■□□□□ 0.39
GABRB3-215ENST00000622697 NR1D1P20393 614 aa17.52■□□□□ 0.39
GABRB3-215ENST00000622697 MXI1P50539 228 aa17.52■□□□□ 0.39
GABRB3-215ENST00000622697 DHX36Q9H2U1 1008 aaKnown RBP17.52■□□□□ 0.39
GABRB3-215ENST00000622697 POTEFA5A3E0 1075 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 PDCLQ13371 301 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 SEPT2Q15019 361 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 POTEGQ6S5H5 508 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 POTEEQ6S8J3 1075 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 EPB41L4AQ9HCS5 686 aaPredicted RBP17.51■□□□□ 0.39
GABRB3-215ENST00000622697 SESN3P58005 492 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 SESTD1Q86VW0 696 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 ANAPC4Q9UJX5 808 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 SEPT10Q9P0V9 454 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 PPM1FP49593 454 aaPredicted RBP17.51■□□□□ 0.39
GABRB3-215ENST00000622697 SNX16P57768 344 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 KCNH2Q12809 1159 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 EEPD1Q7L9B9 569 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 NARFQ9UHQ1 456 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 KCNG1Q9UIX4 513 aa17.51■□□□□ 0.39
GABRB3-215ENST00000622697 P4HA1P13674 534 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 PHBP35232 272 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 YWHAEP62258 255 aaKnown RBP17.5■□□□□ 0.39
GABRB3-215ENST00000622697 DR1Q01658 176 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
GABRB3-215ENST00000622697 RNF14Q9UBS8 474 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 ECEL1O95672 775 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 MAP2K2P36507 400 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 OSTNP61366 133 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 MTERF2Q49AM1 385 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 KAZALD1Q96I82 304 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 NCOA3Q9Y6Q9 1424 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 CCDC197Q8NCU1 140 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 BANK1Q8NDB2 785 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 DNAJC12Q9UKB3 198 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 CSADQ9Y600 493 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 MAD1L1Q9Y6D9 718 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 ABCA9Q8IUA7 1624 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 IQGAP1P46940 1657 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 RNF10Q8N5U6 811 aaKnown RBP17.5■□□□□ 0.39
GABRB3-215ENST00000622697 PLAAQ9Y263 795 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 PNPLA7Q6ZV29 1317 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 TXNDC9O14530 226 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 CD58P19256 250 aa17.5■□□□□ 0.39
GABRB3-215ENST00000622697 YWHAGP61981 247 aaKnown RBP eCLIP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms