RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 AK8Q96MA6 479 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 RPF1Q9H9Y2 349 aaKnown RBP10□□□□□ -0.81
HDAC9-229ENST00000622668 USP25Q9UHP3 1055 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 MYO6Q9UM54 1294 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 COL16A1Q07092 1604 aaPredicted RBP10□□□□□ -0.81
HDAC9-229ENST00000622668 ARHGEF37A1IGU5 675 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 CAPN9O14815 690 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 CLDN3O15551 220 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 PAK1Q13153 545 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 LRRC41Q15345 812 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 SENP2Q9HC62 589 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 GPR25O00155 361 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 ZNF280AP59817 542 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-229ENST00000622668 POTEDQ86YR6 584 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
HDAC9-229ENST00000622668 GOLGA5Q8TBA6 731 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 ANKRD36BP1Q96IX9 119 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 MTMR6Q9Y217 621 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 PFKFB1P16118 471 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 DDIT3P35638 169 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 BEX3Q00994 111 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 CXCL17Q6UXB2 119 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 GPR142Q7Z601 462 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 LRRC71Q8N4P6 559 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 IGDCC4Q8TDY8 1250 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 KIFAP3Q92845 792 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 GMCL1Q96IK5 515 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 MSTO1Q9BUK6 570 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 RGL1Q9NZL6 768 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 ARMCX3Q9UH62 379 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-229ENST00000622668 LTN1O94822 1766 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 BAZ2BQ9UIF8 2168 aaKnown RBP9.99□□□□□ -0.81
HDAC9-229ENST00000622668 TMEM110-MUSTN1A8MSY1 372 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 POTECB2RU33 542 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 XRCC5P13010 732 aaKnown RBP9.99□□□□□ -0.81
HDAC9-229ENST00000622668 TCF7P36402 384 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-229ENST00000622668 C1QTNF8P60827 252 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 TREML2Q5T2D2 321 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 TLK2Q86UE8 772 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 SH3TC2Q8TF17 1288 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 YME1L1Q96TA2 773 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 TINF2Q9BSI4 451 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 SNX25Q9H3E2 840 aa9.99□□□□□ -0.81
HDAC9-229ENST00000622668 C17orf102A2RUQ5 167 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 CLIC2O15247 247 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 CCP110O43303 1012 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 USP11P51784 963 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 CRHR2Q13324 411 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 ACVR2BQ13705 512 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 TOB2Q14106 344 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-229ENST00000622668 CATSPERGQ6ZRH7 1159 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 NECAB2Q7Z6G3 386 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 PPM1KQ8N3J5 372 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 CACTINQ8WUQ7 758 aaKnown RBP9.98□□□□□ -0.81
HDAC9-229ENST00000622668 GCNAQ96QF7 691 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 ACCSQ96QU6 501 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 ARID3AQ99856 593 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 C1orf112Q9NSG2 853 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 SUCLA2Q9P2R7 463 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-229ENST00000622668 POTEFA5A3E0 1075 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 ADCYAP1R1P41586 468 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 SNX16P57768 344 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 XKR3Q5GH77 459 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 POTEGQ6S5H5 508 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 POTEEQ6S8J3 1075 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-229ENST00000622668 COMMD10Q9Y6G5 202 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 GOLGA8IPA6NC78 632 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 GOLGA8JA6NMD2 632 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 GTPBP6O43824 516 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-229ENST00000622668 PLCG1P19174 1290 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 GUCY1A2P33402 732 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 RCAN1P53805 252 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 YWHAEP62258 255 aaKnown RBP9.98□□□□□ -0.81
HDAC9-229ENST00000622668 LACTBP83111 547 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-229ENST00000622668 ADAM9Q13443 819 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 BIRC2Q13490 618 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 FAM110CQ1W6H9 321 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 KMT5BQ4FZB7 885 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 GLYCTKQ8IVS8 523 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 TMEM143Q96AN5 459 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 KCNH7Q9NS40 1196 aa9.98□□□□□ -0.81
HDAC9-229ENST00000622668 MYBP10242 640 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 HSPA6P17066 643 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 GJC2Q5T442 439 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 GLB1LQ6UWU2 654 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 WDR18Q9BV38 432 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 A1CFQ9NQ94 594 aaKnown RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 ANAPC4Q9UJX5 808 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 CICQ96RK0 1608 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 E9PMD0 336 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 MAGEB2O15479 319 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 DAPK3O43293 454 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 GAP43P17677 238 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 PLCB3Q01970 1234 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 PNOCQ13519 176 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 PAN2Q504Q3 1202 aaKnown RBP9.97□□□□□ -0.81
HDAC9-229ENST00000622668 SLC17A8Q8NDX2 589 aa9.97□□□□□ -0.81
HDAC9-229ENST00000622668 FAM149B1Q96BN6 582 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms