RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ZHX1Q9UKY1 873 aaPredicted RBP19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 KDM3AQ9Y4C1 1321 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 SLC26A4O43511 780 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 MED24O75448 989 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 CCNE2O96020 404 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 TXNP10599 105 aaKnown RBP19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 HOXD10P28358 340 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 CYP2C19P33261 490 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 JAK3P52333 1124 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 SP4Q02446 784 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 GRB10Q13322 594 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 ACVR2BQ13705 512 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 EPHA7Q15375 998 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 E2F4Q16254 413 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 ZNF746Q6NUN9 644 aaPredicted RBP19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 CNNM3Q8NE01 707 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 PNMA5Q96PV4 448 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 GZF1Q9H116 711 aaPredicted RBP19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 USP25Q9UHP3 1055 aa19.99■□□□□ 0.79
PTCHD3-202ENST00000622555 POTEB3A0JP26 581 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 WDR64B1ANS9 1081 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 ACTN4O43707 911 aaKnown RBP19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 GGPS1O95749 300 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 RPA1P27694 616 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 SFNP31947 248 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 CYP4A11Q02928 519 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 CCDC62Q6P9F0 684 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 POTEBQ6S5H4 581 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 CATSPER3Q86XQ3 398 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 CEP57L1Q8IYX8 460 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 POLR3CQ9BUI4 534 aaPredicted RBP19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 TNMDQ9H2S6 317 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 RGL1Q9NZL6 768 aa19.98■□□□□ 0.79
PTCHD3-202ENST00000622555 RBM47A0AV96 593 aaKnown RBP19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 SLFN14P0C7P3 912 aa19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 ECM1Q16610 540 aa19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 TMEM119Q4V9L6 283 aa19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 HYIQ5T013 277 aa19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 DYDC2Q96IM9 177 aa19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 NT5C3AQ9H0P0 336 aa19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 MLXIPQ9HAP2 919 aa19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 SRRDQ9UH36 339 aa19.97■□□□□ 0.79
PTCHD3-202ENST00000622555 FARP2O94887 1054 aaPredicted RBP19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 GNRH1P01148 92 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 SPATA31C1P0DKV0 1188 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 ADCYAP1R1P41586 468 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 ACTR2P61160 394 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 ARHGEF6Q15052 776 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 PRAMEF19Q5SWL8 479 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 METTL7BQ6UX53 244 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 SMAP1Q8IYB5 467 aaPredicted RBP19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 DNAJC5GQ8N7S2 189 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 RDM1Q8NG50 284 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 HSD17B14Q9BPX1 270 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 TUFT1Q9NNX1 390 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 WBP1LQ9NX94 342 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 KIAA1024Q9UPX6 916 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 MYH9P35579 1960 aaKnown RBP19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 POTEFA5A3E0 1075 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 IGHA2P01877 340 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 CTTNQ14247 550 aaKnown RBP19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 NAALADL2Q58DX5 795 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 CELF3Q5SZQ8 465 aaKnown RBP19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 PDXDC2PQ6P474 469 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 POTEGQ6S5H5 508 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 TPH2Q8IWU9 490 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 DHX37Q8IY37 1157 aaKnown RBP19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 BANK1Q8NDB2 785 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 NEK9Q8TD19 979 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 TRIB2Q92519 343 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 COPS5Q92905 334 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 CCDC34Q96HJ3 373 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 STK17AQ9UEE5 414 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 TELO2Q9Y4R8 837 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 PCDHA10Q9Y5I2 948 aa19.96■□□□□ 0.79
PTCHD3-202ENST00000622555 SLITRK3O94933 977 aa19.95■□□□□ 0.78
PTCHD3-202ENST00000622555 CCDC144BQ3MJ40 725 aa19.95■□□□□ 0.78
PTCHD3-202ENST00000622555 TMEM63BQ5T3F8 832 aa19.95■□□□□ 0.78
PTCHD3-202ENST00000622555 MFSD14CQ5VZR4 134 aa19.95■□□□□ 0.78
PTCHD3-202ENST00000622555 KANK3Q6NY19 840 aa19.95■□□□□ 0.78
PTCHD3-202ENST00000622555 TRMT44Q8IYL2 757 aaKnown RBP19.95■□□□□ 0.78
PTCHD3-202ENST00000622555 LRRC15Q8TF66 581 aa19.95■□□□□ 0.78
PTCHD3-202ENST00000622555 CUEDC2Q9H467 287 aa19.95■□□□□ 0.78
PTCHD3-202ENST00000622555 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 CTAGE5O15320 804 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 P4HBP07237 508 aaKnown RBP19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 PSAPP07602 524 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 IRF5Q13568 498 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 ZSCAN23Q3MJ62 389 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 IQSEC1Q6DN90 963 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 MIS18BP1Q6P0N0 1132 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 GRAMD1CQ8IYS0 662 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 LXNQ9BS40 222 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 HOOK1Q9UJC3 728 aaKnown RBP19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 PCNTO95613 3336 aa19.94■□□□□ 0.78
PTCHD3-202ENST00000622555 LOXHD1Q8IVV2 1947 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 GH1P01241 217 aa19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 ZNF865P0CJ78 1059 aaPredicted RBP19.93■□□□□ 0.78
PTCHD3-202ENST00000622555 AFMP43652 599 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms