RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 SYKP43405 635 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 LAMC2Q13753 1193 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 CCDC144BQ3MJ40 725 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 CYFIP1Q7L576 1253 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 MIER3Q7Z3K6 550 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 CALML4Q96GE6 196 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 TIGD1Q96MW7 591 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 DISC1Q9NRI5 854 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 Q9Y3F1 56 aa16.27■□□□□ 0.19
GTF3C2-214ENST00000622534 MCM3APO60318 1980 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 GH1P01241 217 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 HMGCRP04035 888 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 HSPA8P11142 646 aaKnown RBP16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 CDC25AP30304 524 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 DHX37Q8IY37 1157 aaKnown RBP16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 EIF2AK1Q9BQI3 630 aaKnown RBP16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 NT5C3AQ9H0P0 336 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 BCAS3Q9H6U6 928 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 MLXIPQ9HAP2 919 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 TRIM17Q9Y577 477 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 PCDHA10Q9Y5I2 948 aa16.26■□□□□ 0.19
GTF3C2-214ENST00000622534 CHMP2AO43633 222 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 SPATA31C1P0DKV0 1188 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 SMPD1P17405 629 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 ACTR2P61160 394 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 TNFAIP2Q03169 654 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 ARHGAP1Q07960 439 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 TMEM119Q4V9L6 283 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 PRAMEF19Q5SWL8 479 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 MAP3K21Q5TCX8 1036 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 ABHD15Q6UXT9 468 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 ELOA2Q8IYF1 753 aaPredicted RBP16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 PNMA5Q96PV4 448 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 CUEDC2Q9H467 287 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 DDX19AQ9NUU7 478 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 GNEQ9Y223 722 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 A0A087X0B3 334 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 IGKV6D-21A0A0A0MT36 114 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 TRAK2O60296 914 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 NR1I2O75469 434 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 SLITRK3O94933 977 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 ZNF202O95125 648 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 P4HBP07237 508 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 PSAPP07602 524 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 AKR1A1P14550 325 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 CCT6AP40227 531 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 GRB10Q13322 594 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 E2F4Q16254 413 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 MIS18BP1Q6P0N0 1132 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 CATSPER3Q86XQ3 398 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 IQUBQ8NA54 791 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 TRPV1Q8NER1 839 aa16.25■□□□□ 0.19
GTF3C2-214ENST00000622534 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 POLR2DO15514 142 aaKnown RBP16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 MED24O75448 989 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 LYPLA2O95372 231 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 SUPT20HL2P0C7V6 817 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 CACNB2Q08289 660 aaPredicted RBP16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 RRAGBQ5VZM2 374 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 SEPT1Q8WYJ6 367 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 GPR20Q99678 358 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 DACT1Q9NYF0 836 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 STK17AQ9UEE5 414 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 PTPN22Q9Y2R2 807 aa16.24■□□□□ 0.19
GTF3C2-214ENST00000622534 GSTTP1A0A1W2PQM5 241 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 FOXN1O15353 648 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 DKC1O60832 514 aaKnown RBP eCLIP16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 ELNP15502 786 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 CTCFP49711 727 aaPredicted RBP16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 TPRNQ4KMQ1 711 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 TMEM63BQ5T3F8 832 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 PPTC7Q8NI37 304 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 COPS5Q92905 334 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 DYDC2Q96IM9 177 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 CDK5RAP3Q96JB5 506 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 MAGEF1Q9HAY2 307 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 SAMM50Q9Y512 469 aa16.23■□□□□ 0.19
GTF3C2-214ENST00000622534 SEPT4O43236 478 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 KINO60870 393 aaKnown RBP16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 SLFN14P0C7P3 912 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 HOXD8P13378 290 aaPredicted RBP16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 PLCG1P19174 1290 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 GRK4P32298 578 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 QARSP47897 775 aaKnown RBP16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 PSMC5P62195 406 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 NKX3-2P78367 333 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 ECM1Q16610 540 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 KRBA2Q6ZNG9 492 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 RASSF8Q8NHQ8 419 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 AFAP1L1Q8TED9 768 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 SPATA33Q96N06 139 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 ZSWIM4Q9H7M6 989 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 RGL1Q9NZL6 768 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 PTCH2Q9Y6C5 1203 aa16.22■□□□□ 0.19
GTF3C2-214ENST00000622534 ADCY6O43306 1168 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms