RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 MTMR3Q13615 1198 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 PUM1Q14671 1186 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNX12-206ENST00000622259 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 SYCE2Q6PIF2 218 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 UBALD2Q8IYN6 164 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 KBTBD3Q8NAB2 608 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 NSUN6Q8TEA1 469 aaKnown RBP17.07■□□□□ 0.32
SNX12-206ENST00000622259 LINC01599Q8WXQ3 324 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 SPATA33Q96N06 139 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 RMDN3Q96TC7 470 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 TMEM47Q9BQJ4 181 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 SETD4Q9NVD3 440 aa17.07■□□□□ 0.32
SNX12-206ENST00000622259 CHD8Q9HCK8 2581 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 PPFIA3O75145 1194 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 PDHBP11177 359 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 DUSP6Q16828 381 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 PAN2Q504Q3 1202 aaKnown RBP17.06■□□□□ 0.32
SNX12-206ENST00000622259 CELF3Q5SZQ8 465 aaKnown RBP17.06■□□□□ 0.32
SNX12-206ENST00000622259 NEK1Q96PY6 1258 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 IWS1Q96ST2 819 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 CPVLQ9H3G5 476 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 BCAS3Q9H6U6 928 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 EHMT1Q9H9B1 1298 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 TSHZ2Q9NRE2 1034 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 DLL3Q9NYJ7 618 aa17.06■□□□□ 0.32
SNX12-206ENST00000622259 C2CD4DB7Z1M9 353 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 H3BRB1 525 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 EIF3JO75822 258 aaKnown RBP17.05■□□□□ 0.32
SNX12-206ENST00000622259 GGPS1O95749 300 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 SLC3A2P08195 630 aaKnown RBP17.05■□□□□ 0.32
SNX12-206ENST00000622259 CLCN5P51795 746 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 KCNC3Q14003 757 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 LPIN1Q14693 890 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 ANGPT1Q15389 498 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 CRIPAKQ8N1N5 446 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 KCNG4Q8TDN1 519 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 GPKOWQ92917 476 aaPredicted RBP eCLIP17.05■□□□□ 0.32
SNX12-206ENST00000622259 NAPBQ9H115 298 aa17.05■□□□□ 0.32
SNX12-206ENST00000622259 TUT1Q9H6E5 874 aaKnown RBP17.05■□□□□ 0.32
SNX12-206ENST00000622259 FOXP2O15409 715 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 RANBP6O60518 1105 aaKnown RBP17.04■□□□□ 0.32
SNX12-206ENST00000622259 RAB11FIP3O75154 756 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 ASGR2P07307 311 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 NR3C2P08235 984 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 TECP42680 631 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 GATMP50440 423 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 ERVFC1P60507 584 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 ADAM17P78536 824 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 ZNF543Q08ER8 600 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 MGAT3Q09327 533 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 ARHGEF16Q5VV41 709 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 ANKRD54Q6NXT1 300 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 CMTR2Q8IYT2 770 aaKnown RBP17.04■□□□□ 0.32
SNX12-206ENST00000622259 FLCNQ8NFG4 579 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 MICAL1Q8TDZ2 1067 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
SNX12-206ENST00000622259 USP24Q9UPU5 2620 aa17.03■□□□□ 0.32
SNX12-206ENST00000622259 SMARCA5O60264 1052 aaPredicted RBP17.03■□□□□ 0.32
SNX12-206ENST00000622259 LMNAP02545 664 aaKnown RBP17.03■□□□□ 0.32
SNX12-206ENST00000622259 LGALS2P05162 132 aa17.03■□□□□ 0.32
SNX12-206ENST00000622259 TOP1P11387 765 aaKnown RBP17.03■□□□□ 0.32
SNX12-206ENST00000622259 NPR3P17342 541 aa17.03■□□□□ 0.32
SNX12-206ENST00000622259 UBA1P22314 1058 aaKnown RBP17.03■□□□□ 0.32
SNX12-206ENST00000622259 RTN4RL1Q86UN2 441 aaPredicted RBP17.03■□□□□ 0.32
SNX12-206ENST00000622259 ZFP91Q96JP5 570 aaPredicted RBP17.03■□□□□ 0.32
SNX12-206ENST00000622259 NACAP1Q9BZK3 213 aa17.03■□□□□ 0.32
SNX12-206ENST00000622259 MFSD1Q9H3U5 465 aa17.03■□□□□ 0.32
SNX12-206ENST00000622259 PXMP2Q9NR77 195 aa17.03■□□□□ 0.32
SNX12-206ENST00000622259 ATRXP46100 2492 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 TSHZ3Q63HK5 1081 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 TMEM184AQ6ZMB5 413 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 RUFY4Q6ZNE9 571 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 UBA5Q9GZZ9 404 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 POMKQ9H5K3 350 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 TELO2Q9Y4R8 837 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 R4GN57 208 aa17.02■□□□□ 0.32
SNX12-206ENST00000622259 GPR179Q6PRD1 2367 aa17.02■□□□□ 0.31
SNX12-206ENST00000622259 GOLGA8HP0CJ92 632 aa17.01■□□□□ 0.31
SNX12-206ENST00000622259 SNHG28P0DPA3 235 aa17.01■□□□□ 0.31
SNX12-206ENST00000622259 LLGL2Q6P1M3 1020 aa17.01■□□□□ 0.31
SNX12-206ENST00000622259 TRIM50Q86XT4 487 aa17.01■□□□□ 0.31
SNX12-206ENST00000622259 DCLK2Q8N568 766 aa17.01■□□□□ 0.31
SNX12-206ENST00000622259 CDCA3Q99618 268 aaPredicted RBP17.01■□□□□ 0.31
SNX12-206ENST00000622259 NR2E1Q9Y466 385 aa17.01■□□□□ 0.31
SNX12-206ENST00000622259 FSCN2O14926 492 aa17■□□□□ 0.31
SNX12-206ENST00000622259 MYCLP12524 364 aaPredicted RBP17■□□□□ 0.31
SNX12-206ENST00000622259 AOC1P19801 751 aa17■□□□□ 0.31
SNX12-206ENST00000622259 ARHGAP4P98171 946 aa17■□□□□ 0.31
SNX12-206ENST00000622259 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
SNX12-206ENST00000622259 FBXO47Q5MNV8 452 aa17■□□□□ 0.31
SNX12-206ENST00000622259 DTWD2Q8NBA8 298 aa17■□□□□ 0.31
SNX12-206ENST00000622259 IL31RAQ8NI17 732 aa17■□□□□ 0.31
SNX12-206ENST00000622259 PANK1Q8TE04 598 aa17■□□□□ 0.31
SNX12-206ENST00000622259 LMBR1Q8WVP7 490 aa17■□□□□ 0.31
SNX12-206ENST00000622259 AGO3Q9H9G7 860 aaKnown RBP17■□□□□ 0.31
SNX12-206ENST00000622259 HCSTQ9UBK5 93 aa17■□□□□ 0.31
SNX12-206ENST00000622259 RALYQ9UKM9 306 aaKnown RBP17■□□□□ 0.31
SNX12-206ENST00000622259 ABCB11O95342 1321 aa16.99■□□□□ 0.31
SNX12-206ENST00000622259 ZFYP08048 801 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms