RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 TTLL7Q6ZT98 887 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 CATSPER3Q86XQ3 398 aa10.67□□□□□ -0.7
COL4A6-210ENST00000621266 CNOT6LQ96LI5 555 aaKnown RBP10.67□□□□□ -0.7
COL4A6-210ENST00000621266 CA4P22748 312 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 DYNLT1P63172 113 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 IQCB1Q15051 598 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 ZC3H12BQ5HYM0 836 aaKnown RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 HABP4Q5JVS0 413 aaKnown RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 TBC1D22AQ8WUA7 517 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 PGBD1Q96JS3 809 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 ANO3Q9BYT9 981 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 MLXIPLQ9NP71 852 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 MAGI2Q86UL8 1455 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 KDRP35968 1356 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 KRT4P19013 534 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 ATP6V1E1P36543 226 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 BRINP3Q76B58 766 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 PPM1KQ8N3J5 372 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 FAM161BQ96MY7 647 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 GPR101Q96P66 508 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 FMO2Q99518 471 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 SPTLC3Q9NUV7 552 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 MTMR6Q9Y217 621 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 GYG1P46976 350 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 GLE1Q53GS7 698 aaKnown RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 SPOPLQ6IQ16 392 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 MED10Q9BTT4 135 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 GLT8D2Q9H1C3 349 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 ARMCX3Q9UH62 379 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 TRIM66O15016 1216 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 KIF19Q2TAC6 998 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 CDAN1Q8IWY9 1227 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 MKL2Q9ULH7 1088 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 AATKQ6ZMQ8 1374 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 IBTKQ9P2D0 1353 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 NBNO60934 754 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 SEC24DO94855 1032 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 ZAP70P43403 619 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 ERFP50548 548 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 RPS8P62241 208 aaKnown RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 SMYD4Q8IYR2 804 aaPredicted RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 DEPDC1BQ8WUY9 529 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 TTC17Q96AE7 1141 aa10.66□□□□□ -0.7
COL4A6-210ENST00000621266 OLA1Q9NTK5 396 aaKnown RBP10.66□□□□□ -0.7
COL4A6-210ENST00000621266 E2F6O75461 281 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 ATXN8OSP0DMR3 200 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 ATP5JP18859 108 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 YARSP54577 528 aaKnown RBP10.65□□□□□ -0.7
COL4A6-210ENST00000621266 HDAC4P56524 1084 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-210ENST00000621266 OCRLQ01968 901 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 CUL3Q13618 768 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 CYTH1Q15438 398 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 ATP11BQ9Y2G3 1177 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-210ENST00000621266 MLH3Q9UHC1 1453 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 ACTN1P12814 892 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 EPHB1P54762 984 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 BASP1P80723 227 aaKnown RBP10.65□□□□□ -0.7
COL4A6-210ENST00000621266 PPP2R5BQ15173 497 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 NLRP14Q86W24 1093 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 CDC26Q8NHZ8 85 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 SLC5A4Q9NY91 659 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 ABCC4O15439 1325 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 APOA1P02647 267 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 PYGBP11216 843 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 CMA1P23946 247 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 ELF1P32519 619 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 DPCR1Q3MIW9 517 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 NCLNQ969V3 563 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 NUDCD1Q96RS6 583 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 NDE1Q9NXR1 346 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.65□□□□□ -0.7
COL4A6-210ENST00000621266 ZNF532Q9HCE3 1301 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 VCAM1P19320 739 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 FAM102BQ5T8I3 360 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 CC2D1AQ6P1N0 951 aaPredicted RBP10.65□□□□□ -0.7
COL4A6-210ENST00000621266 RNF207Q6ZRF8 634 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 CRLF3Q8IUI8 442 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 CALR3Q96L12 384 aaKnown RBP10.65□□□□□ -0.7
COL4A6-210ENST00000621266 TUBGCP2Q9BSJ2 902 aa10.65□□□□□ -0.7
COL4A6-210ENST00000621266 E7EWF7 191 aa10.65□□□□□ -0.71
COL4A6-210ENST00000621266 DR1Q01658 176 aa10.65□□□□□ -0.71
COL4A6-210ENST00000621266 ADCY2Q08462 1091 aa10.65□□□□□ -0.71
COL4A6-210ENST00000621266 FAM47AQ5JRC9 791 aa10.65□□□□□ -0.71
COL4A6-210ENST00000621266 TRAF7Q6Q0C0 670 aa10.65□□□□□ -0.71
COL4A6-210ENST00000621266 METTL13Q8N6R0 699 aa10.65□□□□□ -0.71
COL4A6-210ENST00000621266 IL17RAQ96F46 866 aa10.65□□□□□ -0.71
COL4A6-210ENST00000621266 GSDMAQ96QA5 445 aa10.65□□□□□ -0.71
COL4A6-210ENST00000621266 LBHD1Q9BQE6 289 aaPredicted RBP10.65□□□□□ -0.71
COL4A6-210ENST00000621266 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 CAPN9O14815 690 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TTI1O43156 1089 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 OATP04181 439 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 ADAM9Q13443 819 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 TMEM154Q6P9G4 183 aa10.64□□□□□ -0.71
COL4A6-210ENST00000621266 ATP6V0A1Q93050 837 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms