RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 HPS3Q969F9 1004 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SELENOSQ9BQE4 189 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 SAR1BQ9Y6B6 198 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 FAM169AQ9Y6X4 670 aa9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 COL1A1P02452 1464 aaPredicted RBP9.06□□□□□ -0.96
PTPDC1-204ENST00000620992 LGALS16A8MUM7 142 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 ATP1A1P05023 1023 aaKnown RBP9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 PLCG1P19174 1290 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 KRT83P78385 493 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 MTERF2Q49AM1 385 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 CASC4Q6P4E1 433 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 TSNARE1Q96NA8 513 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 HAUS4Q9H6D7 363 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 MAGED2Q9UNF1 606 aaPredicted RBP9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 ITGB4P16144 1822 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 BNIP3LO60238 219 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 CEP104O60308 925 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 NPR1P16066 1061 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 TMOD1P28289 359 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 BIRC2Q13490 618 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 GEN1Q17RS7 908 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 RCSD1Q6JBY9 416 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 USP17L6PQ6QN14 398 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 KRT26Q7Z3Y9 468 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 UHMK1Q8TAS1 419 aaKnown RBP9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 TBCKQ8TEA7 893 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 NLRP4Q96MN2 994 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 POLIQ9UNA4 740 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 SHANK3Q9BYB0 1731 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 LRRC10BA6NIK2 292 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 E7EVH7 732 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 GABPAQ06546 454 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 NAA35Q5VZE5 725 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 FBXO33Q7Z6M2 555 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 POMGNT1Q8WZA1 660 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 MASTLQ96GX5 879 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 CD209Q9NNX6 404 aa9.05□□□□□ -0.96
PTPDC1-204ENST00000620992 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 TTLL1O95922 423 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 EEF1GP26641 437 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 SF3B3Q15393 1217 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 IRF2BP1Q8IU81 584 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 FAM149B1Q96BN6 582 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 CNOT6LQ96LI5 555 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 PPANQ9NQ55 473 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 PI4KBQ9UBF8 816 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 NXF1Q9UBU9 619 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 PARP2Q9UGN5 583 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 NARFQ9UHQ1 456 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 PCDHA6Q9UN73 950 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 PCDHA8Q9Y5H6 950 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 SHTN1A0MZ66 631 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 FCER1AP12319 257 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 ZBTB16Q05516 673 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 NAALADL2Q58DX5 795 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 GSPT2Q8IYD1 628 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 ABI1Q8IZP0 508 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 KANSL2Q9H9L4 492 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 IL17RBQ9NRM6 502 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 LARSQ9P2J5 1176 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 L1RE1Q9UN81 338 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 SPATA31A1Q5TZJ5 1347 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 LRRN2O75325 713 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 OR52Z1P0C646 297 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 MYBP10242 640 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 MRPS25P82663 173 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 ZBTB33Q86T24 672 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 MSANTD4Q8NCY6 345 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 MICAL1Q8TDZ2 1067 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 EXOC4Q96A65 974 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 CEP170P1Q96L14 293 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 FAM193BQ96PV7 902 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 MED10Q9BTT4 135 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 REXO2Q9Y3B8 237 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 DUSP10Q9Y6W6 482 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 MAP2K7O14733 419 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 HPDP32754 393 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 CDK8P49336 464 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 TUBB4BP68371 445 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 MXRA7P84157 204 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 CKAP4Q07065 602 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 PIGOQ8TEQ8 1089 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 ZNF577Q9BSK1 485 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 NHEJ1Q9H9Q4 299 aaPredicted RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 RAVER2Q9HCJ3 691 aaKnown RBP9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 CACNA1GO43497 2377 aa9.04□□□□□ -0.96
PTPDC1-204ENST00000620992 TIAM2Q8IVF5 1701 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 CAPN9O14815 690 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 ZNF185O15231 689 aa9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 TFAMQ00059 246 aaKnown RBP9.03□□□□□ -0.96
PTPDC1-204ENST00000620992 RNASELQ05823 741 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms