RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 ZIM3Q96PE6 472 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 RABGAP1Q9Y3P9 1069 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 POTEB3A0JP26 581 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 POTECB2RU33 542 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 KRT5P13647 590 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 LLGL1Q15334 1064 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 C10orf76Q5T2E6 689 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 POTEBQ6S5H4 581 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 FAM186BQ8IYM0 893 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 SPATA20Q8TB22 786 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 MAGOHBQ96A72 148 aaKnown RBP13.42□□□□□ -0.26
SPCS1-206ENST00000619898 ATP6V1G3Q96LB4 118 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 CEP63Q96MT8 703 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 EDEM3Q9BZQ6 932 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 SERPINB13Q9UIV8 391 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 SSU72P8A0A1W2PR75 194 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 RNF225M0QZC1 329 aaPredicted RBP13.42□□□□□ -0.26
SPCS1-206ENST00000619898 LRRN2O75325 713 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 PLCB3Q01970 1234 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 FBXW10Q5XX13 1052 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 TBC1D9BQ66K14 1250 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 SLFN13Q68D06 897 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 FMO2Q99518 471 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 PNMA6FA0A0J9YX94 578 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 A0A1W2PQJ5 194 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 FGGP02679 453 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 CLTAP09496 248 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 SPZ1Q9BXG8 430 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 TAF1DQ9H5J8 278 aaPredicted RBP13.42□□□□□ -0.26
SPCS1-206ENST00000619898 INTS9Q9NV88 658 aaKnown RBP13.42□□□□□ -0.26
SPCS1-206ENST00000619898 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
SPCS1-206ENST00000619898 VEGFAP15692 232 aaPredicted RBP13.41□□□□□ -0.26
SPCS1-206ENST00000619898 LMNB1P20700 586 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 E2F5Q15329 346 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 CCDC188H7C350 402 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 GAS7O60861 476 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 PPP1R37O75864 691 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 KLRK1P26718 216 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 ATP5DP30049 168 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 VPS41P49754 854 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 LACTBP83111 547 aaPredicted RBP13.41□□□□□ -0.26
SPCS1-206ENST00000619898 SNCBQ16143 134 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 FBXO11Q86XK2 927 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L15C9J2P7 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L13C9JLJ4 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L11C9JVI0 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L18D6R9N7 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L22D6RA61 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L17D6RBQ6 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L19D6RCP7 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L20D6RJB6 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L24Q0WX57 530 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 MESDQ14696 234 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 USP17L6PQ6QN14 398 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 NLRP14Q86W24 1093 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 CCDC197Q8NCU1 140 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 NEDD1Q8NHV4 660 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 ARL8AQ96BM9 186 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 IFT74Q96LB3 600 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 ARHGAP20Q9P2F6 1191 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 PARP2Q9UGN5 583 aa13.41□□□□□ -0.26
SPCS1-206ENST00000619898 SLCO1A2P46721 670 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 CLUL1Q15846 466 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 ZYXQ15942 572 aaKnown RBP13.4□□□□□ -0.26
SPCS1-206ENST00000619898 ZNF365Q70YC5 407 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 INTS8Q75QN2 995 aaKnown RBP13.4□□□□□ -0.26
SPCS1-206ENST00000619898 BHMT2Q9H2M3 363 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 HOMER3Q9NSC5 361 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 LTN1O94822 1766 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 KLRC1P26715 233 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 PBX1P40424 430 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 SF3B3Q15393 1217 aaKnown RBP13.4□□□□□ -0.26
SPCS1-206ENST00000619898 SLC18A3Q16572 532 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 PROCA1Q8NCQ7 364 aaPredicted RBP13.4□□□□□ -0.26
SPCS1-206ENST00000619898 HDAC7Q8WUI4 952 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 MRRFQ96E11 262 aaKnown RBP13.4□□□□□ -0.26
SPCS1-206ENST00000619898 ZMYND12Q9H0C1 365 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 GRID2IPA4D2P6 1211 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 SFI1A8K8P3 1242 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 H0YIN7 160 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 HOXA7P31268 230 aaPredicted RBP13.4□□□□□ -0.26
SPCS1-206ENST00000619898 SETDB1Q15047 1291 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 PPP4R3AQ6IN85 833 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 FBXO33Q7Z6M2 555 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 SFR1Q86XK3 245 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 RUBCNQ92622 972 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 QTRT2Q9H974 415 aaKnown RBP13.4□□□□□ -0.26
SPCS1-206ENST00000619898 PTPN22Q9Y2R2 807 aa13.4□□□□□ -0.26
SPCS1-206ENST00000619898 PSMC2P35998 433 aaKnown RBP13.39□□□□□ -0.27
SPCS1-206ENST00000619898 ODR4Q5SWX8 454 aa13.39□□□□□ -0.27
SPCS1-206ENST00000619898 GJA3Q9Y6H8 435 aa13.39□□□□□ -0.27
SPCS1-206ENST00000619898 MAGOHP61326 146 aaKnown RBP13.39□□□□□ -0.27
SPCS1-206ENST00000619898 ORC2Q13416 577 aaPredicted RBP13.39□□□□□ -0.27
SPCS1-206ENST00000619898 TEKT1Q969V4 418 aa13.39□□□□□ -0.27
SPCS1-206ENST00000619898 TBC1D31Q96DN5 1066 aa13.39□□□□□ -0.27
SPCS1-206ENST00000619898 MED15Q96RN5 788 aa13.39□□□□□ -0.27
SPCS1-206ENST00000619898 AMNQ9BXJ7 453 aa13.39□□□□□ -0.27
SPCS1-206ENST00000619898 ANO3Q9BYT9 981 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms