RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 STX6O43752 255 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 CSPG5O95196 566 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 FDX1P10109 184 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 SCG2P13521 617 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 SYT1P21579 422 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 RFC2P35250 354 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 PDE4DQ08499 809 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 BFSP2Q13515 415 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 GPNMBQ14956 572 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 PFKFB3Q16875 520 aaPredicted RBP10.55□□□□□ -0.72
SYN3-213ENST00000619146 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 ADGRF4Q8IZF3 695 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
SYN3-213ENST00000619146 SEZ6LQ9BYH1 1024 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 UBA5Q9GZZ9 404 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
SYN3-213ENST00000619146 ZDBF2Q9HCK1 2354 aa10.55□□□□□ -0.72
SYN3-213ENST00000619146 PNMA6FA0A0J9YX94 578 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 LINC01553A4QN01 128 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 PRR33A8MZF0 331 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 PITPNM1O00562 1244 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 ZBTB5O15062 677 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 NBNO60934 754 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 ICAM1P05362 532 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 TXNP10599 105 aaKnown RBP10.54□□□□□ -0.72
SYN3-213ENST00000619146 NHLH1Q02575 133 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 SAFBQ15424 915 aaKnown RBP eCLIP10.54□□□□□ -0.72
SYN3-213ENST00000619146 GALNT17Q6IS24 598 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 NFRKBQ6P4R8 1299 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
SYN3-213ENST00000619146 SEPT14Q6ZU15 432 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 LRRC8DQ7L1W4 858 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 MORC4Q8TE76 937 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 CCDC12Q8WUD4 166 aaPredicted RBP10.54□□□□□ -0.72
SYN3-213ENST00000619146 AFG1LQ8WV93 481 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 DHX38Q92620 1227 aaKnown RBP10.54□□□□□ -0.72
SYN3-213ENST00000619146 MTMR8Q96EF0 704 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 FBXL18Q96ME1 805 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 TGS1Q96RS0 853 aaKnown RBP10.54□□□□□ -0.72
SYN3-213ENST00000619146 PHOX2BQ99453 314 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 JMJD4Q9H9V9 463 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 VAT1LQ9HCJ6 419 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 ADD3Q9UEY8 706 aaKnown RBP10.54□□□□□ -0.72
SYN3-213ENST00000619146 ATP6V1DQ9Y5K8 247 aa10.54□□□□□ -0.72
SYN3-213ENST00000619146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.53□□□□□ -0.72
SYN3-213ENST00000619146 PPFIA3O75145 1194 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 BAIAP3O94812 1187 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 BRD1O95696 1058 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 ZSCAN22P10073 491 aaPredicted RBP10.53□□□□□ -0.72
SYN3-213ENST00000619146 ZNF200P98182 395 aaPredicted RBP10.53□□□□□ -0.72
SYN3-213ENST00000619146 CLUL1Q15846 466 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 PKN1Q16512 942 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 LY6KQ17RY6 165 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 SLC35G1Q2M3R5 365 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 LEXMQ3ZCV2 418 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 USH1GQ495M9 461 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 BRDTQ58F21 947 aaPredicted RBP10.53□□□□□ -0.72
SYN3-213ENST00000619146 RNF207Q6ZRF8 634 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 CCDC148Q8NFR7 591 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 WNT8BQ93098 351 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 CTAGE1Q96RT6 745 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 RANBP17Q9H2T7 1088 aaKnown RBP10.53□□□□□ -0.72
SYN3-213ENST00000619146 CPVLQ9H3G5 476 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 MTMR6Q9Y217 621 aa10.53□□□□□ -0.72
SYN3-213ENST00000619146 ZFHX2Q9C0A1 2572 aaPredicted RBP10.52□□□□□ -0.73
SYN3-213ENST00000619146 EVPLQ92817 2033 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 RBM47A0AV96 593 aaKnown RBP10.52□□□□□ -0.73
SYN3-213ENST00000619146 VPS37CA5D8V6 355 aaPredicted RBP10.52□□□□□ -0.73
SYN3-213ENST00000619146 A6NJR5 290 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 UPP2O95045 317 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 GJB5O95377 273 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 CKBP12277 381 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 SELPP16109 830 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 ERVK-21P61565 698 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 RPS6P62753 249 aaKnown RBP10.52□□□□□ -0.73
SYN3-213ENST00000619146 CDC37Q16543 378 aaPredicted RBP10.52□□□□□ -0.73
SYN3-213ENST00000619146 PPP1R18Q6NYC8 613 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 CNKSR3Q6P9H4 555 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 HOMER1Q86YM7 354 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 MYOCDQ8IZQ8 938 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 SCFD2Q8WU76 684 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 CLEC4DQ8WXI8 215 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 PIBF1Q8WXW3 757 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 TBC1D5Q92609 795 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 PIGSQ96S52 555 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 AMNQ9BXJ7 453 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 GLT8D2Q9H1C3 349 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 ZSCAN16Q9H4T2 348 aaPredicted RBP10.52□□□□□ -0.73
SYN3-213ENST00000619146 BRMS1Q9HCU9 246 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 HDAC6Q9UBN7 1215 aa10.52□□□□□ -0.73
SYN3-213ENST00000619146 hCG_1642624A0A1W2PR95 340 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 ESYT2A0FGR8 921 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 GRXCR2A6NFK2 248 aa10.51□□□□□ -0.73
SYN3-213ENST00000619146 DTNBO60941 627 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms