RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CTTNQ14247 550 aaKnown RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 MESDQ14696 234 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 QTRT2Q9H974 415 aaKnown RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 C1orf112Q9NSG2 853 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 KCNG1Q9UIX4 513 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 FLT1P17948 1338 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 ATP2A2P16615 1042 aaKnown RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 KCNH2Q12809 1159 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 TNFAIP1Q13829 316 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 SETDB1Q15047 1291 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 C7orf25Q9BPX7 421 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 PDS5AQ29RF7 1337 aaKnown RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 SF3A3Q12874 501 aaKnown RBP eCLIP15.15■□□□□ 0.023e-6■■■■□ 25.6
CNOT3-210ENST00000618939 ALS2CLQ60I27 953 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 FAM217BQ9NTX9 383 aaPredicted RBP15.15■□□□□ 0.02
CNOT3-210ENST00000618939 AGPAT5Q9NUQ2 364 aa15.15■□□□□ 0.02
CNOT3-210ENST00000618939 SFI1A8K8P3 1242 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 PDIA5Q14554 519 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 ADGRA1Q86SQ6 560 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 FBF1Q8TES7 1133 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 FAM114A2Q9NRY5 505 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 MTMR4Q9NYA4 1195 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 DMP1Q13316 513 aaPredicted RBP15.14■□□□□ 0.01
CNOT3-210ENST00000618939 NFRKBQ6P4R8 1299 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 GSPT2Q8IYD1 628 aaKnown RBP15.14■□□□□ 0.01
CNOT3-210ENST00000618939 RNF10Q8N5U6 811 aaKnown RBP15.14■□□□□ 0.01
CNOT3-210ENST00000618939 MAGOHBQ96A72 148 aaKnown RBP15.14■□□□□ 0.01
CNOT3-210ENST00000618939 OSBPL9Q96SU4 736 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 NFU1Q9UMS0 254 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 POTEFA5A3E0 1075 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 LIG3P49916 1009 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 POTEEQ6S8J3 1075 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 UHMK1Q8TAS1 419 aaKnown RBP15.14■□□□□ 0.01
CNOT3-210ENST00000618939 PIGOQ8TEQ8 1089 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 VTI1AQ96AJ9 217 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 PCIF1Q9H4Z3 704 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 PEAK1Q9H792 1746 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 DAAM1Q9Y4D1 1078 aa15.14■□□□□ 0.01
CNOT3-210ENST00000618939 POLD1P28340 1107 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 WHAMMQ8TF30 809 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 ZMYND12Q9H0C1 365 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 LIG4P49917 911 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 NNTQ13423 1086 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 GNPTABQ3T906 1256 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 CACNA2D3Q8IZS8 1091 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 DEPTORQ8TB45 409 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 MRRFQ96E11 262 aaKnown RBP15.13■□□□□ 0.01
CNOT3-210ENST00000618939 FAM20AQ96MK3 541 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 EDEM3Q9BZQ6 932 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 TRIM10Q9UDY6 481 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 DAGLAQ9Y4D2 1042 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 KNDC1Q76NI1 1749 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 MMP10P09238 476 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 CD19P15391 556 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 VPS41P49754 854 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 TBC1D10BQ4KMP7 808 aaPredicted RBP15.13■□□□□ 0.01
CNOT3-210ENST00000618939 GLE1Q53GS7 698 aaKnown RBP15.13■□□□□ 0.01
CNOT3-210ENST00000618939 INTS8Q75QN2 995 aaKnown RBP15.13■□□□□ 0.01
CNOT3-210ENST00000618939 SPATS2Q86XZ4 545 aaKnown RBP15.13■□□□□ 0.01
CNOT3-210ENST00000618939 VGLL2Q8N8G2 317 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 NT5C1BQ96P26 610 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 ACCSQ96QU6 501 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 NR3C1P04150 777 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 POMGNT1Q8WZA1 660 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 TMEM206Q9H813 350 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 CAPN7Q9Y6W3 813 aa15.13■□□□□ 0.01
CNOT3-210ENST00000618939 COL5A2P05997 1499 aaPredicted RBP15.12■□□□□ 0.01
CNOT3-210ENST00000618939 NCK2O43639 380 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 PKN1Q16512 942 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 AOC3Q16853 763 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 NAALADL2Q58DX5 795 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 C16orf86Q6ZW13 317 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 AP1M1Q9BXS5 423 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 MFAP3P55082 362 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 TTBK2Q6IQ55 1244 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 PODNQ7Z5L7 613 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 CLEC10AQ8IUN9 316 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 HOOK2Q96ED9 719 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 POLD4Q9HCU8 107 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 STAT3P40763 770 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 KNOP1Q1ED39 458 aaKnown RBP15.12■□□□□ 0.01
CNOT3-210ENST00000618939 RCSD1Q6JBY9 416 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 PDXDC1Q6P996 788 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 TBC1D16Q8TBP0 767 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 MASTLQ96GX5 879 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 MMS19Q96T76 1030 aa15.12■□□□□ 0.01
CNOT3-210ENST00000618939 MAK16Q9BXY0 300 aaKnown RBP15.12■□□□□ 0.01
CNOT3-210ENST00000618939 MYMKA6NI61 221 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 F5H6K3 240 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 HNRNPDLO14979 420 aaKnown RBP15.11■□□□□ 0.01
CNOT3-210ENST00000618939 ZNF18P17022 549 aa15.11■□□□□ 0.01
CNOT3-210ENST00000618939 ZSCAN20P17040 1043 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms