RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 CNKSR2Q8WXI2 1034 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 DDX12PQ92771 950 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 SLC5A5Q92911 643 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 FAM53CQ9NYF3 392 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 MAP3K20Q9NYL2 800 aaKnown RBP28.15■■■□□ 2.1
VEGFC-202ENST00000618562 RABGAP1Q9Y3P9 1069 aa28.15■■■□□ 2.1
VEGFC-202ENST00000618562 PVALEFA0A1B0GWK0 134 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 POTEFA5A3E0 1075 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 TRIM49BA6NDI0 452 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 PSMD10O75832 226 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 POTEIP0CG38 1075 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 FCER1AP12319 257 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 RPA1P27694 616 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 RPS6P62753 249 aaKnown RBP28.14■■■□□ 2.1
VEGFC-202ENST00000618562 UBXN1Q04323 297 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 GPR162Q16538 588 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 POTEGQ6S5H5 508 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 POTEEQ6S8J3 1075 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 SLC30A10Q6XR72 485 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 UNC13DQ70J99 1090 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 SAMD3Q8N6K7 520 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 LRRC27Q9C0I9 530 aa28.14■■■□□ 2.1
VEGFC-202ENST00000618562 ARGLU1Q9NWB6 273 aaPredicted RBP28.14■■■□□ 2.1
VEGFC-202ENST00000618562 EML1O00423 815 aa28.14■■■□□ 2.09
VEGFC-202ENST00000618562 KIF5CO60282 957 aa28.14■■■□□ 2.09
VEGFC-202ENST00000618562 TTI2Q6NXR4 508 aa28.14■■■□□ 2.09
VEGFC-202ENST00000618562 RBM46Q8TBY0 533 aaKnown RBP28.14■■■□□ 2.09
VEGFC-202ENST00000618562 TRIM47Q96LD4 638 aa28.14■■■□□ 2.09
VEGFC-202ENST00000618562 ZNF214Q9UL59 606 aaPredicted RBP28.14■■■□□ 2.09
VEGFC-202ENST00000618562 CSADQ9Y600 493 aa28.14■■■□□ 2.09
VEGFC-202ENST00000618562 ARP10275 920 aa28.13■■■□□ 2.09
VEGFC-202ENST00000618562 ZSCAN20P17040 1043 aaPredicted RBP28.13■■■□□ 2.09
VEGFC-202ENST00000618562 PMS1P54277 932 aaKnown RBP28.13■■■□□ 2.09
VEGFC-202ENST00000618562 SETQ01105 290 aaPredicted RBP28.13■■■□□ 2.09
VEGFC-202ENST00000618562 LRCH2Q5VUJ6 765 aa28.13■■■□□ 2.09
VEGFC-202ENST00000618562 OTOP1Q7RTM1 612 aa28.13■■■□□ 2.09
VEGFC-202ENST00000618562 ZC3H15Q8WU90 426 aaKnown RBP28.13■■■□□ 2.09
VEGFC-202ENST00000618562 CDCA5Q96FF9 252 aa28.13■■■□□ 2.09
VEGFC-202ENST00000618562 MXRA8Q9BRK3 442 aa28.13■■■□□ 2.09
VEGFC-202ENST00000618562 FRMPD4Q14CM0 1322 aa28.13■■■□□ 2.09
VEGFC-202ENST00000618562 ITGB5P18084 799 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 OAZ1P54368 228 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 PPP2R3AQ06190 1150 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 KRT222Q8N1A0 295 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 HPS3Q969F9 1004 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 LZTFL1Q9NQ48 299 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 RNF146Q9NTX7 359 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 MAGEC2Q9UBF1 373 aaPredicted RBP28.12■■■□□ 2.09
VEGFC-202ENST00000618562 STK24Q9Y6E0 443 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 BICDL2A1A5D9 508 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 GLTPD2A6NH11 291 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 PLA2G4BP0C869 781 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 TMEM132BQ14DG7 1078 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 COBLL1Q53SF7 1204 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 MB21D1Q8N884 522 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 KIAA0895Q8NCT3 520 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 DNAJC19Q96DA6 116 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 TAAR1Q96RJ0 339 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 ZNF446Q9NWS9 450 aa28.12■■■□□ 2.09
VEGFC-202ENST00000618562 IREB2P48200 963 aaKnown RBP28.11■■■□□ 2.09
VEGFC-202ENST00000618562 CLCN6P51797 869 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 ERVK-24P63145 666 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 SNRNP48Q6IEG0 339 aaKnown RBP28.11■■■□□ 2.09
VEGFC-202ENST00000618562 CCNE1P24864 410 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 KRT9P35527 623 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 EHHADHQ08426 723 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 PPP2R5CQ13362 524 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 RNF207Q6ZRF8 634 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 CREBRFQ8IUR6 639 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 ZNF507Q8TCN5 953 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 EIF2AK1Q9BQI3 630 aaKnown RBP28.11■■■□□ 2.09
VEGFC-202ENST00000618562 ZNF577Q9BSK1 485 aa28.11■■■□□ 2.09
VEGFC-202ENST00000618562 SCN4AP35499 1836 aa28.1■■■□□ 2.09
VEGFC-202ENST00000618562 ZC3H4Q9UPT8 1303 aaKnown RBP28.1■■■□□ 2.09
VEGFC-202ENST00000618562 SPDYE16A6NNV3 312 aaPredicted RBP28.1■■■□□ 2.09
VEGFC-202ENST00000618562 SSBP05455 408 aaKnown RBP eCLIP28.1■■■□□ 2.09
VEGFC-202ENST00000618562 PSMC6P62333 389 aa28.1■■■□□ 2.09
VEGFC-202ENST00000618562 TUBB2AQ13885 445 aa28.1■■■□□ 2.09
VEGFC-202ENST00000618562 PCNX4Q63HM2 1172 aa28.1■■■□□ 2.09
VEGFC-202ENST00000618562 NSMFQ6X4W1 530 aa28.1■■■□□ 2.09
VEGFC-202ENST00000618562 POLR3CQ9BUI4 534 aaPredicted RBP28.1■■■□□ 2.09
VEGFC-202ENST00000618562 TUBB2BQ9BVA1 445 aa28.1■■■□□ 2.09
VEGFC-202ENST00000618562 ATP2A1O14983 1001 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 GAS7O60861 476 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 IDEP14735 1019 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 CYP4A11Q02928 519 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 MOB2Q70IA6 237 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 P2RX5Q93086 422 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 SLC39A2Q9NP94 309 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 MYPNQ86TC9 1320 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 RNF225M0QZC1 329 aaPredicted RBP28.09■■■□□ 2.09
VEGFC-202ENST00000618562 BCRP11274 1271 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 DNM2P50570 870 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 SLC12A3P55017 1021 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 MRPS9P82933 396 aaKnown RBP28.09■■■□□ 2.09
VEGFC-202ENST00000618562 BMS1Q14692 1282 aaKnown RBP28.09■■■□□ 2.09
VEGFC-202ENST00000618562 TREML2Q5T2D2 321 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 RSRC2Q7L4I2 434 aaKnown RBP28.09■■■□□ 2.09
VEGFC-202ENST00000618562 FAM114A1Q8IWE2 563 aa28.09■■■□□ 2.09
VEGFC-202ENST00000618562 GPR161Q8N6U8 529 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms