RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 TTC1Q99614 292 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 NOC4LQ9BVI4 516 aaKnown RBP11.94□□□□□ -0.5
POLR2A-209ENST00000617998 EVA1BQ9NVM1 165 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 PCDHB9Q9Y5E1 797 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 PPP2R5CQ13362 524 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 CCDC77Q9BR77 488 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 SLC38A10Q9HBR0 1119 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 SUCLA2Q9P2R7 463 aaPredicted RBP11.94□□□□□ -0.5
POLR2A-209ENST00000617998 IFFO1Q0D2I5 559 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 TMEM47Q9BQJ4 181 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 AFG3L2Q9Y4W6 797 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 A6NJR5 290 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 RSPH10B2B2RC85 870 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 GNRH1P01148 92 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 RSPH10BP0C881 870 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 CYP27A1Q02318 531 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 UBXN1Q04323 297 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 ZNF512Q96ME7 567 aaPredicted RBP11.94□□□□□ -0.5
POLR2A-209ENST00000617998 MEIS1O00470 390 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 VIMP08670 466 aaKnown RBP11.94□□□□□ -0.5
POLR2A-209ENST00000617998 ELNP15502 786 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 ERVK-24P63145 666 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 VWA3BQ502W6 1294 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 SLC10A5Q5PT55 438 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 ZMYM1Q5SVZ6 1142 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 MOB2Q70IA6 237 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 DYDC1Q8WWB3 177 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 HEXIM2Q96MH2 286 aaKnown RBP11.94□□□□□ -0.5
POLR2A-209ENST00000617998 SELENOOQ9BVL4 669 aa11.94□□□□□ -0.5
POLR2A-209ENST00000617998 H7C4K7 107 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 XYLBO75191 536 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 SLC4A1P02730 911 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 ACADMP11310 421 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 CYP2C19P33261 490 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 PTGISQ16647 500 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 MGAT5BQ3V5L5 792 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 NAA15Q9BXJ9 866 aaKnown RBP11.93□□□□□ -0.5
POLR2A-209ENST00000617998 SPATC1LQ9H0A9 340 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
POLR2A-209ENST00000617998 GAP43P17677 238 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 SP100P23497 879 aaPredicted RBP11.93□□□□□ -0.5
POLR2A-209ENST00000617998 GRIK1P39086 918 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 PPP2R2DQ66LE6 453 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 PUS7LQ9H0K6 701 aaKnown RBP11.93□□□□□ -0.5
POLR2A-209ENST00000617998 PCDHB4Q9Y5E5 795 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 NR3C2P08235 984 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 CTTNQ14247 550 aaKnown RBP11.93□□□□□ -0.5
POLR2A-209ENST00000617998 CCDC63Q8NA47 563 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 APBA2Q99767 749 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 SEPT10Q9P0V9 454 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 SPATA31D1Q6ZQQ2 1576 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 CARNS1A5YM72 827 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 NDUFB10O96000 172 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 LDHAP00338 332 aaKnown RBP11.93□□□□□ -0.5
POLR2A-209ENST00000617998 CSRNP2Q9H175 543 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 CCDC68Q9H2F9 335 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 SUDS3Q9H7L9 328 aaPredicted RBP11.93□□□□□ -0.5
POLR2A-209ENST00000617998 ANAPC5Q9UJX4 755 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 SNX17Q15036 470 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 TMX3Q96JJ7 454 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 ZDHHC15Q96MV8 337 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 TMEM206Q9H813 350 aa11.93□□□□□ -0.5
POLR2A-209ENST00000617998 EFCAB13Q8IY85 973 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 C11orf49Q9H6J7 331 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 SLC38A7Q9NVC3 462 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 MAPK8IP1Q9UQF2 711 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 GPR25O00155 361 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 IGKV5-2P06315 115 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 MYZAPP0CAP1 466 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 ADCYAP1R1P41586 468 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 FSCN1Q16658 493 aaKnown RBP11.92□□□□□ -0.5
POLR2A-209ENST00000617998 BANK1Q8NDB2 785 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 ZNF560Q96MR9 790 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 LLPHQ9BRT6 129 aaKnown RBP11.92□□□□□ -0.5
POLR2A-209ENST00000617998 ABHD16BQ9H3Z7 469 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
POLR2A-209ENST00000617998 PCDHB15Q9Y5E8 787 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 ZBTB48P10074 688 aaPredicted RBP11.92□□□□□ -0.5
POLR2A-209ENST00000617998 CPA1P15085 419 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 KYAT1Q16773 422 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 QRICH1Q2TAL8 776 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 PALM2Q8IXS6 379 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 PCDHA10Q9Y5I2 948 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 COL5A2P05997 1499 aaPredicted RBP11.92□□□□□ -0.5
POLR2A-209ENST00000617998 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
POLR2A-209ENST00000617998 DONSONQ9NYP3 566 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 NCAM2O15394 837 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 ZSCAN22P10073 491 aaPredicted RBP11.92□□□□□ -0.5
POLR2A-209ENST00000617998 PEX3P56589 373 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 TLK2Q86UE8 772 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 RGL4Q8IZJ4 473 aa11.92□□□□□ -0.5
POLR2A-209ENST00000617998 LRRC31Q6UY01 552 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 CSGALNACT2Q8N6G5 542 aa11.91□□□□□ -0.5
POLR2A-209ENST00000617998 RASGRP4Q8TDF6 673 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms