RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 PPLO60437 1756 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 KCNK3O14649 394 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 ENTPD3O75355 529 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 PTK2Q05397 1052 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 TSC1Q92574 1164 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 CUEDC2Q9H467 287 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 HGSO14964 777 aaPredicted RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 GFPT2O94808 682 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 CLCN1P35523 988 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 SNX16P57768 344 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 YWHAEP62258 255 aaKnown RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 TTLL4Q14679 1199 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 MESDQ14696 234 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 NBPF12Q5TAG4 269 aaPredicted RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 FASTKD5Q7L8L6 764 aaKnown RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 KIAA1524Q8TCG1 905 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 VCPKMTQ9H867 229 aa11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 PPANQ9NQ55 473 aaKnown RBP11.07□□□□□ -0.64
SMARCA1-205ENST00000617310 IGSF3O75054 1194 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 CTSHP09668 335 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 GAP43P17677 238 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 GPR75-ASB3A0A0A6YYF3 556 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 NDC80O14777 642 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 FOXN1O15353 648 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 THAP12O43422 761 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 ANTXR2P58335 489 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 CFAP58Q5T655 872 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 CCDC26Q8TAB7 109 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 HPS3Q969F9 1004 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 PRDM5Q9NQX1 630 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 GCNT4Q9P109 453 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 GGPS1O95749 300 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 CYP27A1Q02318 531 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 CEP55Q53EZ4 464 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 FAM133AQ8N9E0 248 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 IGDCC4Q8TDY8 1250 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 ANKRD36BP1Q96IX9 119 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 LXNQ9BS40 222 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 RABEP2Q9H5N1 569 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 COL5A2P05997 1499 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 CCNE1P24864 410 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 HPDP32754 393 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 PRELPP51888 382 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 SLITRK6Q9H5Y7 841 aa11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-205ENST00000617310 POLRMTO00411 1230 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 N4BP1O75113 896 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 PDHBP11177 359 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 EHHADHQ08426 723 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 MAPK6Q16659 721 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 ZNF658Q5TYW1 1059 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 UHMK1Q8TAS1 419 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 PSPC1Q8WXF1 523 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 CCDC94Q9BW85 323 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 IMPACTQ9P2X3 320 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 EPN1Q9Y6I3 576 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 DDTLA6NHG4 134 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 ENC1O14682 589 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 CLDN3O15551 220 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 XPOTO43592 962 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 AFPP02771 609 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 QARSP47897 775 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 GCLMP48507 274 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 TMEM62Q0P6H9 643 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 KRT81Q14533 505 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 ARL6IP4Q66PJ3 421 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 AMFRQ9UKV5 643 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 DENND3A2RUS2 1198 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 ATXN8OSP0DMR3 200 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 NEDD9Q14511 834 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 C4orf50Q6ZRC1 276 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 NME8Q8N427 588 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 DHTKD1Q96HY7 919 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 FHDC1Q9C0D6 1143 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 SNX25Q9H3E2 840 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 MAGEF1Q9HAY2 307 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 DCCP43146 1447 aa11.05□□□□□ -0.64
SMARCA1-205ENST00000617310 RNF8O76064 485 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 EXOSC10Q01780 885 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 SNAPC2Q13487 334 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 LONRF2Q1L5Z9 754 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 SAAL1Q96ER3 474 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 ZNF302Q9NR11 478 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 SEPT10Q9P0V9 454 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 SLURP2P0DP57 97 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 TAL1P17542 331 aaPredicted RBP11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 KRT76Q01546 638 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 ZBTB16Q05516 673 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 ITKQ08881 620 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 MAN2A1Q16706 1144 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 ZNF568Q3ZCX4 644 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 USP49Q70CQ1 688 aa11.04□□□□□ -0.64
SMARCA1-205ENST00000617310 NAP1L3Q99457 506 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms