RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CTDNEP1O95476 244 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 F2P00734 622 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 CXCL10P02778 98 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 CKBP12277 381 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 SCG2P13521 617 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 XBP1P17861 261 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 EIF2AK2P19525 551 aaKnown RBP16.99■□□□□ 0.31
UBXN1-218ENST00000616865 DEFB103AP81534 67 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 ST3GAL1Q11201 340 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 SLC35G1Q2M3R5 365 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 ARHGEF16Q5VV41 709 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 TMCO2Q7Z6W1 182 aaPredicted RBP16.99■□□□□ 0.31
UBXN1-218ENST00000616865 C7orf31Q8N865 590 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 MTMR8Q96EF0 704 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 C1QTNF1Q9BXJ1 281 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 HDAC6Q9UBN7 1215 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
UBXN1-218ENST00000616865 DTNBO60941 627 aa16.98■□□□□ 0.31
UBXN1-218ENST00000616865 EIF3JO75822 258 aaKnown RBP16.98■□□□□ 0.31
UBXN1-218ENST00000616865 PSEN2P49810 448 aa16.98■□□□□ 0.31
UBXN1-218ENST00000616865 TRIM29Q14134 588 aa16.98■□□□□ 0.31
UBXN1-218ENST00000616865 SPRYD3Q8NCJ5 442 aa16.98■□□□□ 0.31
UBXN1-218ENST00000616865 PPTC7Q8NI37 304 aa16.98■□□□□ 0.31
UBXN1-218ENST00000616865 HLA-CQ95604 372 aa16.98■□□□□ 0.31
UBXN1-218ENST00000616865 PXMP2Q9NR77 195 aa16.98■□□□□ 0.31
UBXN1-218ENST00000616865 PCDHA1Q9Y5I3 950 aa16.98■□□□□ 0.31
UBXN1-218ENST00000616865 ABHD14A-ACY1A0A1B0GW23 586 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 hCG_1984214I3L0E3 225 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 HAS3O00219 553 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 GJB5O95377 273 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 CFBP00751 764 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 NR3C2P08235 984 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 HSD17B4P51659 736 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 NAPAP54920 295 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 GHRHRQ02643 423 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 PTK7Q13308 1070 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 LAMC2Q13753 1193 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 MFSD10Q14728 455 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 PFKFB3Q16875 520 aaPredicted RBP16.97■□□□□ 0.31
UBXN1-218ENST00000616865 KIAA0753Q2KHM9 967 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 TCTN1Q2MV58 587 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 ZNF713Q8N859 430 aaPredicted RBP16.97■□□□□ 0.31
UBXN1-218ENST00000616865 GDPD5Q8WTR4 605 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 CCDC12Q8WUD4 166 aaPredicted RBP16.97■□□□□ 0.31
UBXN1-218ENST00000616865 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
UBXN1-218ENST00000616865 INTS4Q96HW7 963 aaKnown RBP16.97■□□□□ 0.31
UBXN1-218ENST00000616865 ALG1Q9BT22 464 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 ZBED2Q9BTP6 218 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 MICAL3Q7RTP6 2002 aa16.97■□□□□ 0.31
UBXN1-218ENST00000616865 BAZ2BQ9UIF8 2168 aaKnown RBP16.96■□□□□ 0.31
UBXN1-218ENST00000616865 OPLAHO14841 1288 aa16.96■□□□□ 0.31
UBXN1-218ENST00000616865 HOXD8P13378 290 aaPredicted RBP16.96■□□□□ 0.31
UBXN1-218ENST00000616865 GJB2P29033 226 aa16.96■□□□□ 0.31
UBXN1-218ENST00000616865 PLA2G5P39877 138 aa16.96■□□□□ 0.31
UBXN1-218ENST00000616865 FOSBP53539 338 aa16.96■□□□□ 0.31
UBXN1-218ENST00000616865 TRIM71Q2Q1W2 868 aaKnown RBP16.96■□□□□ 0.31
UBXN1-218ENST00000616865 TRAF7Q6Q0C0 670 aa16.96■□□□□ 0.31
UBXN1-218ENST00000616865 DHX37Q8IY37 1157 aaKnown RBP16.96■□□□□ 0.31
UBXN1-218ENST00000616865 SMARCC2Q8TAQ2 1214 aa16.96■□□□□ 0.31
UBXN1-218ENST00000616865 WNT8BQ93098 351 aa16.96■□□□□ 0.31
UBXN1-218ENST00000616865 LMCD1Q9NZU5 365 aa16.96■□□□□ 0.31
UBXN1-218ENST00000616865 EFCAB14O75071 495 aa16.95■□□□□ 0.3
UBXN1-218ENST00000616865 RGS20O76081 388 aa16.95■□□□□ 0.3
UBXN1-218ENST00000616865 WWC2Q6AWC2 1192 aa16.95■□□□□ 0.3
UBXN1-218ENST00000616865 CCDC148Q8NFR7 591 aa16.95■□□□□ 0.3
UBXN1-218ENST00000616865 RAD9AQ99638 391 aa16.95■□□□□ 0.3
UBXN1-218ENST00000616865 PDCD2LQ9BRP1 358 aa16.95■□□□□ 0.3
UBXN1-218ENST00000616865 BARHL2Q9NY43 387 aa16.95■□□□□ 0.3
UBXN1-218ENST00000616865 MTUS1Q9ULD2 1270 aa16.95■□□□□ 0.3
UBXN1-218ENST00000616865 LINC01553A4QN01 128 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 PPP1R11O60927 126 aaPredicted RBP16.94■□□□□ 0.3
UBXN1-218ENST00000616865 NLRP5P59047 1200 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 ERVK-21P61565 698 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 IKBKEQ14164 716 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 PKN1Q16512 942 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 ZNF618Q5T7W0 954 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 PPP1R18Q6NYC8 613 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 C8orf76Q96K31 380 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
UBXN1-218ENST00000616865 SUGCTQ9HAC7 445 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 MAP3K20Q9NYL2 800 aaKnown RBP16.94■□□□□ 0.3
UBXN1-218ENST00000616865 VPS54Q9P1Q0 977 aa16.94■□□□□ 0.3
UBXN1-218ENST00000616865 STXBP3O00186 592 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 MYCLP12524 364 aaPredicted RBP16.93■□□□□ 0.3
UBXN1-218ENST00000616865 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
UBXN1-218ENST00000616865 PDCP20941 246 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 PGM5Q15124 567 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 HSDL1Q3SXM5 330 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 MYSM1Q5VVJ2 828 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 KCNV1Q6PIU1 500 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 CUL5Q93034 780 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 SPATA33Q96N06 139 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 AIFM3Q96NN9 605 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 EPHX3Q9H6B9 360 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 C6orf50Q9HD87 102 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 SH3GLB2Q9NR46 395 aa16.93■□□□□ 0.3
UBXN1-218ENST00000616865 H3BQV1 296 aa16.92■□□□□ 0.3
UBXN1-218ENST00000616865 RBAK-RBAKDNI3L0D1 243 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms