RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 SKOR1P84550 965 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 LRP8Q14114 963 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 SH2D4BQ5SQS7 431 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 ZNF554Q86TJ5 538 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 SESTD1Q86VW0 696 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 C1orf131Q8NDD1 294 aaKnown RBP16.81■□□□□ 0.28
NOP56-220ENST00000616692 RIN2Q8WYP3 895 aaPredicted RBP16.81■□□□□ 0.28
NOP56-220ENST00000616692 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
NOP56-220ENST00000616692 TANGO6Q9C0B7 1094 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 ASTN2O75129 1339 aaPredicted RBP16.81■□□□□ 0.28
NOP56-220ENST00000616692 BICDL2A1A5D9 508 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 TBC1D12O60347 775 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 MGEA5O60502 916 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 CUTAO60888 179 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 TBCAO75347 108 aaKnown RBP16.81■□□□□ 0.28
NOP56-220ENST00000616692 CTAG1AP78358 180 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 FGD4Q96M96 766 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 NEK1Q96PY6 1258 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 MAP3K2Q9Y2U5 619 aa16.81■□□□□ 0.28
NOP56-220ENST00000616692 IGHMBP2P38935 993 aaKnown RBP16.8■□□□□ 0.28
NOP56-220ENST00000616692 CD97P48960 835 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 NLRP5P59047 1200 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 KLC1Q07866 573 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 STIM1Q13586 685 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 LDLRAD1Q5T700 205 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 FBXO46Q6PJ61 603 aaPredicted RBP16.8■□□□□ 0.28
NOP56-220ENST00000616692 CEP295NLQ96MC4 621 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 ANKRD27Q96NW4 1050 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 NAP1L3Q99457 506 aaPredicted RBP16.8■□□□□ 0.28
NOP56-220ENST00000616692 ZSWIM4Q9H7M6 989 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 HPS5Q9UPZ3 1129 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 USO1O60763 962 aaKnown RBP16.8■□□□□ 0.28
NOP56-220ENST00000616692 GGCXP38435 758 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 SLC44A4Q53GD3 710 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 ANKRD20A8PQ5CZ79 823 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 ZNF362Q5T0B9 420 aaPredicted RBP16.8■□□□□ 0.28
NOP56-220ENST00000616692 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
NOP56-220ENST00000616692 C8orf58Q8NAV2 365 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 ZNF280CQ8ND82 737 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 ZNF473Q8WTR7 871 aaKnown RBP16.8■□□□□ 0.28
NOP56-220ENST00000616692 WDR24Q96S15 920 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 ZNF180Q9UJW8 692 aa16.8■□□□□ 0.28
NOP56-220ENST00000616692 APAF1O14727 1248 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 DNAJC8O75937 253 aaPredicted RBP16.79■□□□□ 0.28
NOP56-220ENST00000616692 IGKV5-2P06315 115 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 GNG11P61952 73 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 CEBPZQ03701 1054 aaKnown RBP16.79■□□□□ 0.28
NOP56-220ENST00000616692 SULT2A1Q06520 285 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 PPIDQ08752 370 aaKnown RBP16.79■□□□□ 0.28
NOP56-220ENST00000616692 IMMTQ16891 758 aaKnown RBP16.79■□□□□ 0.28
NOP56-220ENST00000616692 ZNF804AQ7Z570 1209 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 DCLK2Q8N568 766 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 TTC39CQ8N584 583 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 KIFC2Q96AC6 838 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 CTAGE1Q96RT6 745 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 EIF2AQ9BY44 585 aaKnown RBP16.79■□□□□ 0.28
NOP56-220ENST00000616692 VCX3AQ9NNX9 186 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 VWA3AA6NCI4 1184 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 VARSP26640 1264 aaKnown RBP16.79■□□□□ 0.28
NOP56-220ENST00000616692 NEK4P51957 841 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 LRRC43Q8N309 656 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 ZNF713Q8N859 430 aaPredicted RBP16.79■□□□□ 0.28
NOP56-220ENST00000616692 VMP1Q96GC9 406 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 ZNF148Q9UQR1 794 aa16.79■□□□□ 0.28
NOP56-220ENST00000616692 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 DNM1LO00429 736 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 WNT10BO00744 389 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 TTI1O43156 1089 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 FLOT1O75955 427 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 CSF1RP07333 972 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 TUBP50607 506 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 P3H1Q32P28 736 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 TCERG1LQ5VWI1 586 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 ADALQ6DHV7 355 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 C11orf74Q86VG3 221 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 DDX19BQ9UMR2 479 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 MANSC4A6NHS7 340 aaPredicted RBP16.78■□□□□ 0.28
NOP56-220ENST00000616692 GPR25O00155 361 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 FCHSD1Q86WN1 690 aa16.78■□□□□ 0.28
NOP56-220ENST00000616692 SYT2Q8N9I0 419 aaPredicted RBP16.78■□□□□ 0.28
NOP56-220ENST00000616692 RNF25Q96BH1 459 aaPredicted RBP16.78■□□□□ 0.28
NOP56-220ENST00000616692 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.78■□□□□ 0.28
NOP56-220ENST00000616692 FKTNO75072 461 aa16.77■□□□□ 0.28
NOP56-220ENST00000616692 ATICP31939 592 aa16.77■□□□□ 0.28
NOP56-220ENST00000616692 INTS3Q68E01 1043 aaKnown RBP16.77■□□□□ 0.28
NOP56-220ENST00000616692 ATL3Q6DD88 541 aa16.77■□□□□ 0.28
NOP56-220ENST00000616692 ZNF365Q70YC5 407 aa16.77■□□□□ 0.28
NOP56-220ENST00000616692 GDAP1Q8TB36 358 aa16.77■□□□□ 0.28
NOP56-220ENST00000616692 EPN3Q9H201 632 aa16.77■□□□□ 0.28
NOP56-220ENST00000616692 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 SCTRP47872 440 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 PDE6CP51160 858 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 SH3BGRP55822 239 aaPredicted RBP16.77■□□□□ 0.27
NOP56-220ENST00000616692 PPP4CP60510 307 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 CDK17Q00537 523 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 SPECC1Q5M775 1068 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 SPDYCQ5MJ68 293 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 WDR93Q6P2C0 686 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 APPBP2Q92624 585 aa16.77■□□□□ 0.27
NOP56-220ENST00000616692 TTC14Q96N46 770 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms