RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 CEP95Q96GE4 821 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 SFI1A8K8P3 1242 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 DHX9Q08211 1270 aaKnown RBP20.22■□□□□ 0.83
CDH23-212ENST00000616684 DDX23Q9BUQ8 820 aaKnown RBP20.22■□□□□ 0.83
CDH23-212ENST00000616684 HSPA6P17066 643 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 EXOSC10Q01780 885 aaKnown RBP20.22■□□□□ 0.83
CDH23-212ENST00000616684 SNX1Q13596 522 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 MTERF2Q49AM1 385 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 TBC1D9BQ66K14 1250 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 FAM81BQ96LP2 452 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 MAD1L1Q9Y6D9 718 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L15C9J2P7 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L13C9JLJ4 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L11C9JVI0 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L18D6R9N7 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L22D6RA61 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L17D6RBQ6 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L19D6RCP7 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L20D6RJB6 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L24Q0WX57 530 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 CASP8Q14790 479 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 MIS18BP1Q6P0N0 1132 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP17L6PQ6QN14 398 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 SHC4Q6S5L8 630 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 PDZD4Q76G19 769 aaPredicted RBP20.22■□□□□ 0.83
CDH23-212ENST00000616684 ABHD10Q9NUJ1 306 aa20.22■□□□□ 0.83
CDH23-212ENST00000616684 USP42Q9H9J4 1324 aaKnown RBP20.21■□□□□ 0.83
CDH23-212ENST00000616684 GOLGA8SH3BPF8 625 aa20.21■□□□□ 0.83
CDH23-212ENST00000616684 PRR29P0C7W0 189 aa20.21■□□□□ 0.83
CDH23-212ENST00000616684 YWHAGP61981 247 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDH23-212ENST00000616684 TFAMQ00059 246 aaKnown RBP20.21■□□□□ 0.83
CDH23-212ENST00000616684 PIGOQ8TEQ8 1089 aa20.21■□□□□ 0.83
CDH23-212ENST00000616684 UTYO14607 1347 aa20.21■□□□□ 0.83
CDH23-212ENST00000616684 KIF28PB7ZC32 967 aa20.21■□□□□ 0.83
CDH23-212ENST00000616684 NOL3O60936 208 aaKnown RBP20.21■□□□□ 0.83
CDH23-212ENST00000616684 ABCB6Q9NP58 842 aa20.21■□□□□ 0.83
CDH23-212ENST00000616684 ECEL1O95672 775 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 SUPT20HL1Q3ZLR7 823 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 MASTLQ96GX5 879 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.2■□□□□ 0.82
CDH23-212ENST00000616684 SETBP1Q9Y6X0 1596 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 SGK1O00141 431 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 TXNRD1Q16881 649 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 NME8Q8N427 588 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 PPP4R1Q8TF05 950 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 TACO1Q9BSH4 297 aaKnown RBP20.2■□□□□ 0.82
CDH23-212ENST00000616684 SLC7A5Q01650 507 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 CYP4F22Q6NT55 531 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 FAM84BQ96KN1 310 aaPredicted RBP20.2■□□□□ 0.82
CDH23-212ENST00000616684 PCDHA6Q9UN73 950 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 PCDHA8Q9Y5H6 950 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 ASNSP08243 561 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 CRKP46108 304 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 CCDC38Q502W7 563 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 RNF10Q8N5U6 811 aaKnown RBP20.2■□□□□ 0.82
CDH23-212ENST00000616684 DCAF4Q8WV16 495 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 ANKRD36BP1Q96IX9 119 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 APOL6Q9BWW8 343 aa20.2■□□□□ 0.82
CDH23-212ENST00000616684 MRPL47Q9HD33 250 aaKnown RBP20.2■□□□□ 0.82
CDH23-212ENST00000616684 PVALEFA0A1B0GWK0 134 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 SH3BP5O60239 455 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 GRM4Q14833 912 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 CROCC2H7BZ55 1655 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 SYNJ2BP-COX16A0A087WUM0 186 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 FAM196BA6NMK8 535 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 TLR3O15455 904 aaKnown RBP20.19■□□□□ 0.82
CDH23-212ENST00000616684 PNMA6AP0CW24 399 aaPredicted RBP20.19■□□□□ 0.82
CDH23-212ENST00000616684 CCND2P30279 289 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 RINT1Q6NUQ1 792 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 LRRC8CQ8TDW0 803 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 COX16Q9P0S2 106 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 NXF1Q9UBU9 619 aaKnown RBP20.19■□□□□ 0.82
CDH23-212ENST00000616684 GOLGA8IPA6NC78 632 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 GOLGA8JA6NMD2 632 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 PDXDC2PQ6P474 469 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 HAUS2Q9NVX0 235 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 SEPT10Q9P0V9 454 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 AFG3L2Q9Y4W6 797 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 A6NJR5 290 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 FAM149B1Q96BN6 582 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 AKT3Q9Y243 479 aa20.19■□□□□ 0.82
CDH23-212ENST00000616684 PNPLA7Q6ZV29 1317 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 CHGBP05060 677 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 ALCAMQ13740 583 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 RFX6Q8HWS3 928 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 MROH7-TTC4A0A0A0MT08 1334 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 E9PMD0 336 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 FOXN1O15353 648 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 EEPD1Q7L9B9 569 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 ZNF341Q9BYN7 854 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 BARHL2Q9NY43 387 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 PP2D1A8MPX8 630 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 USP17L10C9JJH3 530 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 DNAJC24Q6P3W2 148 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 DPP9Q86TI2 863 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 PROM2Q8N271 834 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 AP1M1Q9BXS5 423 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 TEX33O43247 280 aa20.18■□□□□ 0.82
CDH23-212ENST00000616684 HIP1RO75146 1068 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms