RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 SCARF1Q14162 830 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 CRACR2BQ8N4Y2 399 aaPredicted RBP11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 TEX9Q8N6V9 391 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 TRIM7Q9C029 511 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 SLC12A4Q9UP95 1085 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 CREB3O43889 395 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 RNF8O76064 485 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 PDE4DQ08499 809 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 DBN1Q16643 649 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 NUGGCQ68CJ6 796 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 DAAM2Q86T65 1068 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 GALNT15Q8N3T1 639 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 ANKRD42Q8N9B4 389 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 CNKSR1Q969H4 720 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 KCNK9Q9NPC2 374 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 ALDH3A1P30838 453 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 COPS2P61201 443 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 ASIC1P78348 528 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 TCIRG1Q13488 830 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 ADAM22Q9P0K1 906 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 PLAGL2Q9UPG8 496 aa11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 UTP11Q9Y3A2 253 aaKnown RBP11.31□□□□□ -0.6
TNFAIP3-208ENST00000615468 A6NHS1 94 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 IRS4O14654 1257 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 LIN7AO14910 233 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 NLRP5P59047 1200 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 ITIH4Q14624 930 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 FAM47EQ6ZV65 393 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 ZNF572Q7Z3I7 529 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 USP38Q8NB14 1042 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 C1orf131Q8NDD1 294 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 AZI2Q9H6S1 392 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 FGFR1OP2Q9NVK5 253 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 WNT7AO00755 349 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 DENND2CQ68D51 928 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 ATG9AQ7Z3C6 839 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 KSR1Q8IVT5 923 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 FANCBQ8NB91 859 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 SLC4A9Q96Q91 983 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 RAB17Q9H0T7 212 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 NEUROG2Q9H2A3 272 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 PNMA3Q9UL41 463 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 BAZ2BQ9UIF8 2168 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 hCG_2014768A0A024R1R8 64 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 CETN3O15182 167 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 TPP2P29144 1249 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 CNGA1P29973 690 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 PDE6CP51160 858 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 GBP5Q96PP8 586 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 MTRQ99707 1265 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 PYM1Q9BRP8 204 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 CELF4Q9BZC1 486 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 SCOCQ9UIL1 159 aa11.3□□□□□ -0.6
TNFAIP3-208ENST00000615468 BICDL2A1A5D9 508 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 EPHB6O15197 1021 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 KLRC1P26715 233 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 TUBP50607 506 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 RAPGEF1Q13905 1077 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 ANO7Q6IWH7 933 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 OTUD6AQ7L8S5 288 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 TBC1D5Q92609 795 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 RBM41Q96IZ5 413 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 NUDCD1Q96RS6 583 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 GREM2Q9H772 168 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 USH1CQ9Y6N9 552 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 TTI1O43156 1089 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 FLOT1O75955 427 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 PTF1AQ7RTS3 328 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 SYT15Q9BQS2 421 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 USP15Q9Y4E8 981 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 ASAP2O43150 1006 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 PPFIA2O75334 1257 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 RARAP10276 462 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 ITGA6P23229 1130 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 LRP10Q7Z4F1 713 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 P2RX5Q93086 422 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 FMO2Q99518 471 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 ADAMTS1Q9UHI8 967 aa11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
TNFAIP3-208ENST00000615468 PP2D1A8MPX8 630 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 TCP11X1B4DZS4 312 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 H0YGN5 161 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 ECEL1O95672 775 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 PLTPP55058 493 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 FOXO4P98177 505 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 RNASELQ05823 741 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 CCDC25Q86WR0 208 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 ZNF654Q8IZM8 581 aa11.28□□□□□ -0.6
TNFAIP3-208ENST00000615468 GDAP1Q8TB36 358 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms