RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 FAM217BQ9NTX9 383 aaPredicted RBP16.99■□□□□ 0.31
PRKN-211ENST00000615065 THEGQ9P2T0 379 aa16.99■□□□□ 0.31
PRKN-211ENST00000615065 EFCAB14O75071 495 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 GJB5O95377 273 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 GNAT1P11488 350 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 CDC27P30260 824 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 ADAM17P78536 824 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 ARHGAP4P98171 946 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 TJAP1Q5JTD0 557 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 KRT40Q6A162 431 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 DBF4BQ8NFT6 615 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 PGBD1Q96JS3 809 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 RIC8AQ9NPQ8 531 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 JADE2Q9NQC1 790 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 MTCH2Q9Y6C9 303 aa16.98■□□□□ 0.31
PRKN-211ENST00000615065 V9GY48 417 aaPredicted RBP16.98■□□□□ 0.31
PRKN-211ENST00000615065 GSTTP1A0A1W2PQM5 241 aa16.97■□□□□ 0.31
PRKN-211ENST00000615065 STXBP3O00186 592 aa16.97■□□□□ 0.31
PRKN-211ENST00000615065 MKRN4PQ13434 485 aaPredicted RBP16.97■□□□□ 0.31
PRKN-211ENST00000615065 PLEKHG4Q58EX7 1191 aa16.97■□□□□ 0.31
PRKN-211ENST00000615065 PPP1R18Q6NYC8 613 aa16.97■□□□□ 0.31
PRKN-211ENST00000615065 FAM117BQ6P1L5 589 aa16.97■□□□□ 0.31
PRKN-211ENST00000615065 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKN-211ENST00000615065 SYMPKQ92797 1274 aaKnown RBP16.97■□□□□ 0.31
PRKN-211ENST00000615065 KCNB2Q92953 911 aa16.97■□□□□ 0.31
PRKN-211ENST00000615065 CCDC136Q96JN2 1154 aa16.97■□□□□ 0.31
PRKN-211ENST00000615065 EHMT1Q9H9B1 1298 aa16.97■□□□□ 0.31
PRKN-211ENST00000615065 NAP1L2Q9ULW6 460 aaPredicted RBP16.97■□□□□ 0.31
PRKN-211ENST00000615065 CAND2O75155 1236 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 HMGB1P09429 215 aaKnown RBP16.96■□□□□ 0.31
PRKN-211ENST00000615065 POU3F3P20264 500 aaPredicted RBP16.96■□□□□ 0.31
PRKN-211ENST00000615065 MARK3P27448 753 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 ADCY7P51828 1080 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 APOBRQ0VD83 1088 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 CYP2W1Q8TAV3 490 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
PRKN-211ENST00000615065 SEPT1Q8WYJ6 367 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 RAD9AQ99638 391 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 ANO3Q9BYT9 981 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 BARHL2Q9NY43 387 aa16.96■□□□□ 0.31
PRKN-211ENST00000615065 NRCAMQ92823 1304 aa16.96■□□□□ 0.3
PRKN-211ENST00000615065 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
PRKN-211ENST00000615065 RCAN1P53805 252 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 FGD1P98174 961 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 GRB10Q13322 594 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 RUFY4Q6ZNE9 571 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 Q6ZUG5 572 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 MYOCDQ8IZQ8 938 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 JAKMIP1Q96N16 626 aaKnown RBP16.95■□□□□ 0.3
PRKN-211ENST00000615065 ASB2Q96Q27 587 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 MXRA8Q9BRK3 442 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 KCNH7Q9NS40 1196 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 TMEM260Q9NX78 707 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 SNX14Q9Y5W7 946 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 TTC28Q96AY4 2481 aa16.95■□□□□ 0.3
PRKN-211ENST00000615065 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 hCG_1984214I3L0E3 225 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 MAFGO15525 162 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 LPXNO60711 386 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 HSPA4P34932 840 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 ADD1P35611 737 aaKnown RBP16.94■□□□□ 0.3
PRKN-211ENST00000615065 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRKN-211ENST00000615065 MRPS5P82675 430 aaKnown RBP16.94■□□□□ 0.3
PRKN-211ENST00000615065 PPFIA1Q13136 1202 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 GRIK4Q16099 956 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 ZNF713Q8N859 430 aaPredicted RBP16.94■□□□□ 0.3
PRKN-211ENST00000615065 GDPD5Q8WTR4 605 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 SEPT8Q92599 483 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 GLG1Q92896 1179 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 PCYT2Q99447 389 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 JPH1Q9HDC5 661 aaPredicted RBP16.94■□□□□ 0.3
PRKN-211ENST00000615065 ERAP1Q9NZ08 941 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 SLC9A2Q9UBY0 812 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 MTUS1Q9ULD2 1270 aa16.94■□□□□ 0.3
PRKN-211ENST00000615065 TCF20Q9UGU0 1960 aaKnown RBP16.93■□□□□ 0.3
PRKN-211ENST00000615065 LINC01553A4QN01 128 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 FOSP01100 380 aaPredicted RBP16.93■□□□□ 0.3
PRKN-211ENST00000615065 AMHP03971 560 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 ARP10275 920 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 CLK2P49760 499 aaKnown RBP16.93■□□□□ 0.3
PRKN-211ENST00000615065 SKIV2LQ15477 1246 aaKnown RBP16.93■□□□□ 0.3
PRKN-211ENST00000615065 FAM26DQ5JW98 314 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 BLOC1S2Q6QNY1 142 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 TEX2Q8IWB9 1127 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 BRF1Q92994 677 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 TSPYL2Q9H2G4 693 aaPredicted RBP16.93■□□□□ 0.3
PRKN-211ENST00000615065 SMARCAD1Q9H4L7 1026 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 NLRC5Q86WI3 1866 aa16.93■□□□□ 0.3
PRKN-211ENST00000615065 NID2Q14112 1375 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 LOXHD1Q8IVV2 1947 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 XIRP2A4UGR9 3374 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.92■□□□□ 0.3
PRKN-211ENST00000615065 CHRNA1P02708 482 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 SCG2P13521 617 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 SREBF1P36956 1147 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 ERVK-21P61565 698 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 TFF2Q03403 129 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 ITGB3BPQ13352 177 aaPredicted RBP16.92■□□□□ 0.3
PRKN-211ENST00000615065 AP3B2Q13367 1082 aa16.92■□□□□ 0.3
PRKN-211ENST00000615065 PFKFB3Q16875 520 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms