RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PSMD10O75832 226 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 GCNT3O95395 438 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 GYPCP04921 128 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 UQCRHP07919 91 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 MYBP10242 640 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 RPA1P27694 616 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 NMT1P30419 496 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 CIITAP33076 1130 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 SLC12A3P55017 1021 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 MAP3K9P80192 1104 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 ITGB3BPQ13352 177 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 ORC2Q13416 577 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 MTMR1Q13613 665 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 PTPN14Q15678 1187 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 MIER3Q7Z3K6 550 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CCDC65Q8IXS2 484 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 MYOCDQ8IZQ8 938 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 CCAR2Q8N163 923 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 MYCT1Q8N699 235 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.82□□□□□ -1.8
LIG4-205ENST00000614526 SMCR8Q8TEV9 937 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 MBOAT7Q96N66 472 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 NAP1L4Q99733 375 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 MXRA8Q9BRK3 442 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 IRX2Q9BZI1 471 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 MMRN2Q9H8L6 949 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 MRPL44Q9H9J2 332 aaKnown RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 FAM207AQ9NSI2 230 aaPredicted RBP3.82□□□□□ -1.8
LIG4-205ENST00000614526 SPTLC3Q9NUV7 552 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TCEAL9Q9UHQ7 104 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 TFR2Q9UP52 801 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 AFG3L2Q9Y4W6 797 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 SNCAIPQ9Y6H5 919 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 KDM3AQ9Y4C1 1321 aa3.82□□□□□ -1.8
LIG4-205ENST00000614526 NRDCO43847 1150 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 CYP3A4P08684 503 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 DSG3P32926 999 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 EPHX2P34913 555 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 KRT9P35527 623 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 NPEPPSP55786 919 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 SOX10P56693 466 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 TRAF1Q13077 416 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 GIT2Q14161 759 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 NAA30Q147X3 362 aaPredicted RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 PGM5Q15124 567 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 SYCP1Q15431 976 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 TKFCQ3LXA3 575 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 SYT10Q6XYQ8 523 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 NCAPG2Q86XI2 1143 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 MCF2L2Q86YR7 1114 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 ANKRD35Q8N283 1001 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 RDH13Q8NBN7 331 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 DHTKD1Q96HY7 919 aaPredicted RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 CTAGE1Q96RT6 745 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 LXNQ9BS40 222 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 TEKT3Q9BXF9 490 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 EHMT1Q9H9B1 1298 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 LZTFL1Q9NQ48 299 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 AGPAT5Q9NUQ2 364 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.81□□□□□ -1.8
LIG4-205ENST00000614526 ZNF112Q9UJU3 913 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 V9GYY5 206 aaPredicted RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 PVALEFA0A1B0GWK0 134 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 TTC26A0AVF1 554 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 SPDYE16A6NNV3 312 aaPredicted RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 RIOK3O14730 519 aaKnown RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 USO1O60763 962 aaKnown RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 TBCAO75347 108 aaKnown RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 MYL1P05976 194 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 NR3C2P08235 984 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 TRIM21P19474 475 aaKnown RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 HSD17B4P51659 736 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 TBX2Q13207 712 aaPredicted RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 CCDC40Q4G0X9 1142 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 PLA2G4FQ68DD2 849 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 RINT1Q6NUQ1 792 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 MOXD1Q6UVY6 613 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 CATSPERGQ6ZRH7 1159 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 SEPT14Q6ZU15 432 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 MB21D1Q8N884 522 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 SCFD1Q8WVM8 642 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 CDCA5Q96FF9 252 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 PPP1R13BQ96KQ4 1090 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 CHP1Q99653 195 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 HSD17B14Q9BPX1 270 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 PDCD2LQ9BRP1 358 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 MAGEF1Q9HAY2 307 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 GPRC5CQ9NQ84 441 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 A1CFQ9NQ94 594 aaKnown RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.81□□□□□ -1.8
LIG4-205ENST00000614526 PXMP2Q9NR77 195 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 LIMA1Q9UHB6 759 aaKnown RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 ZNF214Q9UL59 606 aaPredicted RBP3.81□□□□□ -1.8
LIG4-205ENST00000614526 SYNPO2Q9UMS6 1093 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 BICDL2A1A5D9 508 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 TBX3O15119 743 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 PLA2G6O60733 806 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 FAM13AO94988 1023 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 ABL1P00519 1130 aa3.81□□□□□ -1.8
LIG4-205ENST00000614526 PGK2P07205 417 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms