RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	DNAJC6	O75061	913 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	PSMC2	P35998	433 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	IL9R	Q01113	521 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	DARS2	Q6PI48	645 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	DIS3L2	Q8IYB7	885 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	USP17L3	A6NCW0	530 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	USP17L4	A6NCW7	530 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	OCRL	Q01968	901 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	LRRC23	Q53EV4	343 aa	Predicted RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	USP17L1	Q7RTZ2	530 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	PPP1R12A	O14974	1030 aa	Predicted RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	HSPA1A	P0DMV8	641 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	HSPA1B	P0DMV9	641 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	ATIC	P31939	592 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	KIF19	Q2TAC6	998 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	PDXDC2P	Q6P474	469 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	DDX53	Q86TM3	631 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	FAM160B2	Q86V87	743 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	ANKRD42	Q8N9B4	389 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	FGFR1OP2	Q9NVK5	253 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	STK38L	Q9Y2H1	464 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	EEF1B2	P24534	225 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	BTD	P43251	543 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	TWF2	Q6IBS0	349 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	PCGF5	Q86SE9	256 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	ECT2	Q9H8V3	914 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZC4H2	Q9NQZ6	224 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	MAN1C1	Q9NR34	630 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	DNAJC17	Q9NVM6	304 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	SCOC	Q9UIL1	159 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	WDR48	Q8TAF3	677 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	HEXIM2	Q96MH2	286 aa	Known RBP	13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	KLRF2	D3W0D1	207 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	BBOX1	O75936	387 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	KRT80	Q6KB66	452 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	DNAJC24	Q6P3W2	148 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	OR9Q1	Q8NGQ5	310 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	TUBB6	Q9BUF5	446 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	MAPK4	P31152	587 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	SPOPL	Q6IQ16	392 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	KRT27	Q7Z3Y8	459 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	MRPL50	Q8N5N7	158 aa	Known RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	CFAP61	Q8NHU2	1237 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	CEP170P1	Q96L14	293 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	UIMC1	Q96RL1	719 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	SBNO1	A3KN83	1393 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	TIMM10	P62072	90 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	PPP1R13B	Q96KQ4	1090 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	FAF1	Q9UNN5	650 aa	Predicted RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	RALA	P11233	206 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	MTHFSD	Q2M296	383 aa	Known RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	ENGASE	Q8NFI3	743 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	ATP10B	O94823	1461 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	MYO3B	Q8WXR4	1341 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	LDHA	P00338	332 aa	Known RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	SERPINB2	P05120	415 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	MKRN3	Q13064	507 aa	Known RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	EXOC3L4	Q17RC7	722 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	ULK4	Q96C45	1275 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	DCUN1D1	Q96GG9	259 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	FBXO40	Q9UH90	709 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	PALD1	Q9ULE6	856 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	MED23	Q9ULK4	1368 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	MSH2	P43246	934 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	VCP	P55072	806 aa	Known RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	FLOT2	Q14254	428 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	KRT39	Q6A163	491 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	FAM129A	Q9BZQ8	928 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	MRPL40	Q9NQ50	206 aa	Known RBP	13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	HOXC10	Q9NYD6	342 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	ABCC10	Q5T3U5	1492 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZNF804B	A4D1E1	1349 aa		13.11	□□□□□ -0.31
ABCA2-223	ENST00000614293	FAM47E-STBD1	D6RA91	191 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	BLVRA	P53004	296 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	TRIM60	Q495X7	471 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	CIAPIN1	Q6FI81	312 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	NLRP4	Q96MN2	994 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	GOLGA8M	H3BSY2	632 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	ALDH1A2	O94788	518 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	PIM2	Q9P1W9	311 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	MAP4	P27816	1152 aa	Known RBP	13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	SLC26A7	Q8TE54	656 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	EVA1B	Q9NVM1	165 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	TBC1D12	O60347	775 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	GCFC2	P16383	781 aa	Known RBP	13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	AARS2	Q5JTZ9	985 aa	Known RBP	13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	PNMA1	Q8ND90	353 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	VPS54	Q9P1Q0	977 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	COPG1	Q9Y678	874 aa	Known RBP	13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	PHKA2	P46019	1235 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	KYAT1	Q16773	422 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	BEST2	Q8NFU1	509 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	MICAL3	Q7RTP6	2002 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	BTBD8	Q5XKL5	378 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	CATSPER4	Q7RTX7	472 aa		13.1	□□□□□ -0.31
ABCA2-223	ENST00000614293	TTLL6	Q8N841	843 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms