RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	DHX38	Q92620	1227 aa	Known RBP	12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	KCNB2	Q92953	911 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	MXRA8	Q9BRK3	442 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ANO3	Q9BYT9	981 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RNPEP	Q9H4A4	650 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	JPH1	Q9HDC5	661 aa	Predicted RBP	12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RTN4	Q9NQC3	1192 aa	Known RBP	12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SETD4	Q9NVD3	440 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SLC9A2	Q9UBY0	812 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	YBX2	Q9Y2T7	364 aa	Known RBP	12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	DNAH12	Q6ZR08	3092 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	NRCAM	Q92823	1304 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CPLX1	O14810	134 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CXCL10	P02778	98 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	AMH	P03971	560 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	KCNA2	P16389	499 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	MARK3	P27448	753 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CDC27	P30260	824 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ADD1	P35611	737 aa	Known RBP	12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PPFIA1	Q13136	1202 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CEP55	Q53EZ4	464 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TAF2	Q6P1X5	1199 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TRIM50	Q86XT4	487 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	REXO1	Q8N1G1	1221 aa	Known RBP	12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	IL27	Q8NEV9	243 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PPM1E	Q8WY54	764 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	KCNH7	Q9NS40	1196 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PPP4R2	Q9NY27	417 aa		12.5	□□□□□ -0.41
NPIPB4-222	ENST00000614197	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	NFASC	O94856	1347 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RRN3P2	A6NIE6	340 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197		M0QZ92	97 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TREH	O43280	583 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PRPF3	O43395	683 aa	Known RBP	12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CA3	P07451	260 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CTSH	P09668	335 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SREBF1	P36956	1147 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	WDR5	P61964	334 aa	Known RBP	12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	FUT2	Q10981	343 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	JAKMIP3	Q5VZ66	844 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RUFY3	Q7L099	469 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	FBXL16	Q8N461	479 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SYMPK	Q92797	1274 aa	Known RBP	12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PGBD1	Q96JS3	809 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CTAGE1	Q96RT6	745 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SLC26A6	Q9BXS9	759 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	BCAS3	Q9H6U6	928 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TRPC6	Q9Y210	931 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	KIAA1217	Q5T5P2	1943 aa		12.49	□□□□□ -0.41
NPIPB4-222	ENST00000614197	LAMA3	Q16787	3333 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ESYT2	A0FGR8	921 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	BACH1	O14867	736 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	NBN	O60934	754 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ATP9A	O75110	1047 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	MYOG	P15173	224 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CCT2	P78371	535 aa	Known RBP	12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SET	Q01105	290 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SSRP1	Q08945	709 aa	Known RBP	12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SKIV2L	Q15477	1246 aa	Known RBP	12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TRIM71	Q2Q1W2	868 aa	Known RBP	12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	FAM160B1	Q5W0V3	765 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	NIPA1	Q7RTP0	329 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PLA2G4D	Q86XP0	818 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	MICALL1	Q8N3F8	863 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	LMBR1	Q8WVP7	490 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ARNTL2	Q8WYA1	636 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	APBB2	Q92870	758 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RNF26	Q9BY78	433 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TUBE1	Q9UJT0	475 aa		12.48	□□□□□ -0.41
NPIPB4-222	ENST00000614197	GSTTP1	A0A1W2PQM5	241 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	HOXC8	P31273	242 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SLC26A2	P50443	739 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	STAT5B	P51692	787 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	NLRP5	P59047	1200 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ACTR2	P61160	394 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	IGBP1	P78318	339 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CCDC85B	Q15834	202 aa	Predicted RBP	12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	GRIK4	Q16099	956 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TYW1B	Q6NUM6	668 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	MIS18BP1	Q6P0N0	1132 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	MYOCD	Q8IZQ8	938 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	DBF4B	Q8NFT6	615 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	VWCE	Q96DN2	955 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RAD9A	Q99638	391 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	C22orf23	Q9BZE7	217 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TM6SF1	Q9BZW5	370 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ZMYND12	Q9H0C1	365 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	AGO4	Q9HCK5	861 aa	Known RBP	12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TMEM260	Q9NX78	707 aa		12.47	□□□□□ -0.41
NPIPB4-222	ENST00000614197	MEIS1	O00470	390 aa		12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CDKL5	O76039	1030 aa		12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	GJB5	O95377	273 aa		12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	AR	P10275	920 aa		12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	IFNAR1	P17181	557 aa		12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PDIA3	P30101	505 aa	Known RBP	12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	HIC1	Q14526	733 aa		12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	IER5	Q5VY09	327 aa		12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	FAM117B	Q6P1L5	589 aa		12.46	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PLPPR4	Q7Z2D5	763 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms