RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MCM3APO60318 1980 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 CHD9Q3L8U1 2897 aa12.9□□□□□ -0.34
SLIRP-212ENST00000613856 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 GRXCR1A8MXD5 290 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 MEIS1O00470 390 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 STRNO43815 780 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 FCER1AP12319 257 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 PFKFB1P16118 471 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 LIG1P18858 919 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
SLIRP-212ENST00000613856 EDNRBP24530 442 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 DNAJB2P25686 324 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 CCND2P30279 289 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 ZNF76P36508 570 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 PBX2P40425 430 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 ALDH5A1P51649 535 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-212ENST00000613856 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
SLIRP-212ENST00000613856 IL17AQ16552 155 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 PRR16Q569H4 304 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 VSIG10LQ86VR7 867 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 ENGASEQ8NFI3 743 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 HAS1Q92839 578 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-212ENST00000613856 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 MXRA8Q9BRK3 442 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 RAB34Q9BZG1 259 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 DDX19AQ9NUU7 478 aaKnown RBP12.89□□□□□ -0.35
SLIRP-212ENST00000613856 IVNS1ABPQ9Y6Y0 642 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 CHD7Q9P2D1 2997 aa12.89□□□□□ -0.35
SLIRP-212ENST00000613856 ASTN1O14525 1302 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 XIRP2A4UGR9 3374 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 B4DLN1 442 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 MSH4O15457 936 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 SEPT4O43236 478 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 NR3C2P08235 984 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 DPP9Q86TI2 863 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 PLA2G4DQ86XP0 818 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 FMR1NBQ8N0W7 255 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-212ENST00000613856 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 ARRDC4Q8NCT1 418 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 SYMPKQ92797 1274 aaKnown RBP12.88□□□□□ -0.35
SLIRP-212ENST00000613856 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
SLIRP-212ENST00000613856 MPHOSPH6Q99547 160 aaKnown RBP12.88□□□□□ -0.35
SLIRP-212ENST00000613856 JADE2Q9NQC1 790 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 FAM13BQ9NYF5 915 aa12.88□□□□□ -0.35
SLIRP-212ENST00000613856 TMEM265A0A087WTH1 108 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 A0A1B0GVL5 298 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 SLC26A4O43511 780 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 PQBP1O60828 265 aaKnown RBP12.87□□□□□ -0.35
SLIRP-212ENST00000613856 NR1I2O75469 434 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 PGK1P00558 417 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 ITGB5P18084 799 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 NDUFA8P51970 172 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-212ENST00000613856 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
SLIRP-212ENST00000613856 PDIA5Q14554 519 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 CYP2W1Q8TAV3 490 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 MORC4Q8TE76 937 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 SLC5A5Q92911 643 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 GPRASP2Q96D09 838 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 FGD4Q96M96 766 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 NECAB3Q96P71 396 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-212ENST00000613856 INPP4AQ96PE3 977 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-212ENST00000613856 PYM1Q9BRP8 204 aaKnown RBP12.87□□□□□ -0.35
SLIRP-212ENST00000613856 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 DACT1Q9NYF0 836 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 WDR81Q562E7 1941 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 LOXHD1Q8IVV2 1947 aa12.87□□□□□ -0.35
SLIRP-212ENST00000613856 MAFGO15525 162 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 MARCH6O60337 910 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 CLTBP09497 229 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 MYCLP12524 364 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-212ENST00000613856 TXLNAP40222 546 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 TXKP42681 527 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 SYKP43405 635 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 SPIRE1Q08AE8 756 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 ADGRE1Q14246 886 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 CAVIN1Q6NZI2 390 aaKnown RBP12.86□□□□□ -0.35
SLIRP-212ENST00000613856 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-212ENST00000613856 NLRX1Q86UT6 975 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 CDHR1Q96JP9 859 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 RIT2Q99578 217 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 ANP32EQ9BTT0 268 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 ZNF576Q9H609 170 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 TTC12Q9H892 705 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-212ENST00000613856 TMEM63CQ9P1W3 806 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 VAV3Q9UKW4 847 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 PCDHA12Q9UN75 941 aa12.86□□□□□ -0.35
SLIRP-212ENST00000613856 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
SLIRP-212ENST00000613856 DOCK5Q9H7D0 1870 aa12.85□□□□□ -0.35
SLIRP-212ENST00000613856 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms