RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 FAM47EQ6ZV65 393 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 FTCDO95954 541 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 DYNLT1P63172 113 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 SZRD1Q7Z422 152 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 KCTD6Q8NC69 237 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 NFU1Q9UMS0 254 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 SUGT1Q9Y2Z0 365 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 PDE5AO76074 875 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 ACSL3O95573 720 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 CMA1P23946 247 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 ARFIP2P53365 341 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 RNPEPQ9H4A4 650 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 RAD21L1Q9H4I0 556 aa13.31□□□□□ -0.28
HLCS-207ENST00000612277 TBL3Q12788 808 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 FRA10AC1Q70Z53 315 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 PBXIP1Q96AQ6 731 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 ATP2B4P23634 1241 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 KRT39Q6A163 491 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 ARMCX5Q6P1M9 558 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 TEKT4Q8WW24 435 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 C19orf60Q96EN9 201 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 MPP6Q9NZW5 540 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 HACD3Q9P035 362 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 IBTKQ9P2D0 1353 aaPredicted RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 TMOD1P28289 359 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 ARL4AP40617 200 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 EIF6P56537 245 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 TBC1D10BQ4KMP7 808 aaPredicted RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 RTEL1Q9NZ71 1219 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 INPP5FQ9Y2H2 1132 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 TYW5A2RUC4 315 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 TBC1D4O60343 1298 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 JAK2O60674 1132 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 DLATP10515 647 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 GSPT1P15170 499 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 PPP2R2AP63151 447 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 DZIP3Q86Y13 1208 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 RASA4BC9J798 803 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 RASA4O43374 803 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 GAS7O60861 476 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 ZBED4O75132 1171 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 PTPREP23469 700 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 PPARGP37231 505 aaPredicted RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 IMPG1Q17R60 797 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 REXO1Q8N1G1 1221 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 DDHD1Q8NEL9 900 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 ST13P5Q8NFI4 369 aaPredicted RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 PARVGQ9HBI0 331 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 DISC1Q9NRI5 854 aa13.3□□□□□ -0.28
HLCS-207ENST00000612277 DNAJC17Q9NVM6 304 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 GEMIN8Q9NWZ8 242 aaKnown RBP13.3□□□□□ -0.28
HLCS-207ENST00000612277 PAMP19021 973 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 PMLP29590 882 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 COPS2P61201 443 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 KRR1Q13601 381 aaKnown RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 INPP5AQ14642 412 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 MAPRE2Q15555 327 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 USH1GQ495M9 461 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 ALKBH8Q96BT7 664 aaKnown RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 OTUB1Q96FW1 271 aaPredicted RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 BEGAINQ9BUH8 593 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 CARD9Q9H257 536 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 BLOC1S6Q9UL45 172 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 HECW1Q76N89 1606 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 SNX2O60749 519 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 NT5C1BQ96P26 610 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 TGS1Q96RS0 853 aaKnown RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 TUBGCP2Q9BSJ2 902 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 VPS54Q9P1Q0 977 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 SOX13Q9UN79 622 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 PRDM1O75626 825 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 SRGAP2CP0DJJ0 459 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 ADCK5Q3MIX3 580 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 PDIK1LQ8N165 341 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 MYL10Q9BUA6 226 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 M0R3G1 203 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 NUP62P37198 522 aaPredicted RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 GGCXP38435 758 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 TFAP4Q01664 338 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 DMPKQ09013 629 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 HIC1Q14526 733 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 TMC5Q6UXY8 1006 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 SLFN12Q8IYM2 578 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 VPS39Q96JC1 886 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 PRPF18Q99633 342 aaKnown RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 OSBPL10Q9BXB5 764 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 BIN2Q9UBW5 565 aaPredicted RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 ZMYND8Q9ULU4 1186 aaPredicted RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 TIAM1Q13009 1591 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 CCDC22O60826 627 aa13.29□□□□□ -0.28
HLCS-207ENST00000612277 FMNL1O95466 1100 aaPredicted RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 PAPOLAP51003 745 aaKnown RBP13.29□□□□□ -0.28
HLCS-207ENST00000612277 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms