RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 CCDC77Q9BR77 488 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 RAVER2Q9HCJ3 691 aaKnown RBP14.37□□□□□ -0.11
TCF3-220ENST00000611869 LIMA1Q9UHB6 759 aaKnown RBP14.37□□□□□ -0.11
TCF3-220ENST00000611869 ASIC3Q9UHC3 531 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 IVNS1ABPQ9Y6Y0 642 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 CCDC151A5D8V7 595 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
TCF3-220ENST00000611869 LIN9Q5TKA1 542 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 BANK1Q8NDB2 785 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 DYDC2Q96IM9 177 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 KRT12Q99456 494 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 RGL1Q9NZL6 768 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 JRKLQ9Y4A0 524 aa14.37□□□□□ -0.11
TCF3-220ENST00000611869 BZW2Q9Y6E2 419 aaKnown RBP14.37□□□□□ -0.11
TCF3-220ENST00000611869 KIF13AQ9H1H9 1805 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 MYMKA6NI61 221 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 LLGL1Q15334 1064 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 DPH5Q9H2P9 285 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 ANKFY1Q9P2R3 1169 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 NPHP3-ACAD11A0A0J9YXS1 232 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 PPP1R3GB7ZBB8 358 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 N4BP1O75113 896 aaKnown RBP14.36□□□□□ -0.11
TCF3-220ENST00000611869 RHOBTB3O94955 611 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 SERPING1P05155 500 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 FERP16591 822 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 KCNH2Q12809 1159 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 DCUN1D2Q6PH85 259 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 METTL13Q8N6R0 699 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 IL17RBQ9NRM6 502 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 ABCB11O95342 1321 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 SULF1Q8IWU6 871 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 ATP6V0A1Q93050 837 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 PIM2Q9P1W9 311 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 CACNA1FO60840 1977 aa14.36□□□□□ -0.11
TCF3-220ENST00000611869 GOLGA8IPA6NC78 632 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 GOLGA8JA6NMD2 632 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 USP11P51784 963 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 PDIA5Q14554 519 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 NCAPHQ15003 741 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 RAD9BQ6WBX8 426 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 EEPD1Q7L9B9 569 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 C1orf112Q9NSG2 853 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 IKBKGQ9Y6K9 419 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 USP14P54578 494 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 EVX2Q03828 476 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 EAPPQ56P03 285 aaPredicted RBP14.35□□□□□ -0.11
TCF3-220ENST00000611869 PPP4R3CPQ6ZMV5 832 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 ZNF365Q70YC5 407 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 MYO3BQ8WXR4 1341 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 ALKBH5Q6P6C2 394 aaKnown RBP14.35□□□□□ -0.11
TCF3-220ENST00000611869 SEPT14Q6ZU15 432 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 CPLX4Q7Z7G2 160 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 PROM2Q8N271 834 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 ACCSQ96QU6 501 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 KMT5AQ9NQR1 393 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 NR3C1P04150 777 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 SPP2Q13103 211 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 AGPAT5Q9NUQ2 364 aa14.35□□□□□ -0.11
TCF3-220ENST00000611869 NDUFAB1O14561 156 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 ATP2A1O14983 1001 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 PNMA6AP0CW24 399 aaPredicted RBP14.34□□□□□ -0.11
TCF3-220ENST00000611869 PEX3P56589 373 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 GFPT1Q06210 699 aaPredicted RBP14.34□□□□□ -0.11
TCF3-220ENST00000611869 PPFIA1Q13136 1202 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 GRIK5Q16478 980 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 RMDN3Q96TC7 470 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 KCNK9Q9NPC2 374 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 MESDQ14696 234 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 HERC5Q9UII4 1024 aaKnown RBP14.34□□□□□ -0.11
TCF3-220ENST00000611869 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 A0A1W2PQC6 194 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 GYPCP04921 128 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 PRELPP51888 382 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 RNF207Q6ZRF8 634 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 COL23A1Q86Y22 540 aaPredicted RBP14.34□□□□□ -0.11
TCF3-220ENST00000611869 MSANTD4Q8NCY6 345 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 GIMAP8Q8ND71 665 aaPredicted RBP14.34□□□□□ -0.11
TCF3-220ENST00000611869 C7orf25Q9BPX7 421 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 ABCB6Q9NP58 842 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 NYAP2Q9P242 653 aa14.34□□□□□ -0.11
TCF3-220ENST00000611869 XRN1Q8IZH2 1706 aaKnown RBP14.34□□□□□ -0.11
TCF3-220ENST00000611869 VEGFAP15692 232 aaPredicted RBP14.33□□□□□ -0.11
TCF3-220ENST00000611869 PDE6CP51160 858 aa14.33□□□□□ -0.11
TCF3-220ENST00000611869 SLC7A5Q01650 507 aa14.33□□□□□ -0.11
TCF3-220ENST00000611869 KNOP1Q1ED39 458 aaKnown RBP14.33□□□□□ -0.11
TCF3-220ENST00000611869 KRT71Q3SY84 523 aa14.33□□□□□ -0.11
TCF3-220ENST00000611869 MTERF2Q49AM1 385 aa14.33□□□□□ -0.11
TCF3-220ENST00000611869 SH2D3AQ9BRG2 576 aa14.33□□□□□ -0.11
TCF3-220ENST00000611869 UBE2TQ9NPD8 197 aaPredicted RBP14.33□□□□□ -0.11
TCF3-220ENST00000611869 AGTPBP1Q9UPW5 1226 aa14.33□□□□□ -0.11
TCF3-220ENST00000611869 MRC1P22897 1456 aa14.33□□□□□ -0.11
TCF3-220ENST00000611869 SLC37A4O43826 429 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 KIF4AO95239 1232 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 LMNB1P20700 586 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 VPS41P49754 854 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 MXI1P50539 228 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 MTMR1Q13613 665 aa14.33□□□□□ -0.12
TCF3-220ENST00000611869 CEP63Q96MT8 703 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms