RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TFRCP02786 760 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 GYS2P54840 703 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 SETQ01105 290 aaPredicted RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 CEP55Q53EZ4 464 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 DAAM2Q86T65 1068 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 C4orf32Q8N8J7 132 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 HNRNPLLQ8WVV9 542 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 PNMA5Q96PV4 448 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 FUT8Q9BYC5 575 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 TYW1Q9NV66 732 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 BCCIPQ9P287 314 aaKnown RBP eCLIP6.98□□□□□ -1.298e-7■■■■□ 21.9
SNX13-213ENST00000611725 CCPG1Q9ULG6 757 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 TLDC2A0PJX2 215 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 SPOPO43791 374 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 ASNSP08243 561 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 PSMC2P35998 433 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 EPHB4P54760 987 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 MRPS25P82663 173 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 KNOP1Q1ED39 458 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 RSRC2Q7L4I2 434 aaKnown RBP6.98□□□□□ -1.29
SNX13-213ENST00000611725 CCDC127Q96BQ5 260 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 NUDT12Q9BQG2 462 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 CCDC113Q9H0I3 377 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 MYO3BQ8WXR4 1341 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 A6NNZ2 444 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 RNF40O75150 1001 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 CYP2C19P33261 490 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 SHMT1P34896 483 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 CALCOCO2Q13137 446 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 TUBB8Q3ZCM7 444 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 ZNF577Q9BSK1 485 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 SNX12Q9UMY4 172 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 L1RE1Q9UN81 338 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 EXOC7Q9UPT5 735 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 KCPQ6ZWJ8 1503 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 SFI1A8K8P3 1242 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 BIRC3Q13489 604 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 WDR78Q5VTH9 848 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 SPATA4Q8NEY3 305 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 COG1Q8WTW3 980 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 TFR2Q9UP52 801 aa6.98□□□□□ -1.29
SNX13-213ENST00000611725 K7ENM7 598 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 RNF225M0QZC1 329 aaPredicted RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 C21orf2O43822 256 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 RPA1P27694 616 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 ACTN2P35609 894 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 HDLBPQ00341 1268 aaKnown RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 GFPT1Q06210 699 aaPredicted RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 NLRX1Q86UT6 975 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 EHD4Q9H223 541 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 SEMA6BQ9H3T3 888 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 GCNT4Q9P109 453 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 HERC5Q9UII4 1024 aaKnown RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 AMFRQ9UKV5 643 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 MTUS1Q9ULD2 1270 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 PITPNM2Q9BZ72 1349 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 CYP11B2P19099 503 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 NFRKBQ6P4R8 1299 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 LRRC4BQ9NT99 713 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 RGL1Q9NZL6 768 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 A0A1W2PQJ5 194 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 PGRMC1O00264 195 aaKnown RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 KRIT1O00522 736 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 ARHGAP25P42331 645 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 GUCY2FP51841 1108 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 IL17AQ16552 155 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 FAM160B2Q86V87 743 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 KIAA0895Q8NCT3 520 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 MSANTD4Q8NCY6 345 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 IMPG2Q9BZV3 1241 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 RASAL2Q9UJF2 1139 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 TESPA1A2RU30 521 aaPredicted RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 DDTLA6NHG4 134 aaPredicted RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 PLA2G4AP47712 749 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 XKR9Q5GH70 373 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 BEND6Q5SZJ8 279 aaPredicted RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 MIGA2Q7L4E1 593 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 CERS5Q8N5B7 392 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 SHISA4Q96DD7 197 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 PNMA2Q9UL42 364 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 FAM208AQ9UK61 1670 aaKnown RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 DKC1O60832 514 aaKnown RBP eCLIP6.97□□□□□ -1.29
SNX13-213ENST00000611725 ZBED4O75132 1171 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 APOBEC3HQ6NTF7 200 aaKnown RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 KCNK18Q7Z418 384 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 MCF2L2Q86YR7 1114 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 PPM1KQ8N3J5 372 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 MTMR9Q96QG7 549 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 KRT12Q99456 494 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 SUGCTQ9HAC7 445 aa6.97□□□□□ -1.29
SNX13-213ENST00000611725 MTRF1LQ9UGC7 380 aaKnown RBP6.97□□□□□ -1.29
SNX13-213ENST00000611725 CDK17Q00537 523 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 C2orf54Q08AI8 447 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 APTXQ7Z2E3 356 aaKnown RBP6.96□□□□□ -1.29
SNX13-213ENST00000611725 TTLL6Q8N841 843 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 PNKPQ96T60 521 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 EPB41L5Q9HCM4 733 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 ARHGAP20Q9P2F6 1191 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 ESYT3A0FGR9 886 aa6.96□□□□□ -1.29
SNX13-213ENST00000611725 NCK2O43639 380 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms