RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 RAD9AQ99638 391 aa20.23■□□□□ 0.83
MUC1-224ENST00000611577 DDX41Q9UJV9 622 aaKnown RBP20.23■□□□□ 0.83
MUC1-224ENST00000611577 LIMCH1Q9UPQ0 1083 aa20.23■□□□□ 0.83
MUC1-224ENST00000611577 HCN4Q9Y3Q4 1203 aa20.23■□□□□ 0.83
MUC1-224ENST00000611577 MRVI1Q9Y6F6 885 aa20.23■□□□□ 0.83
MUC1-224ENST00000611577 ABHD14A-ACY1A0A1B0GW23 586 aa20.22■□□□□ 0.83
MUC1-224ENST00000611577 PRPF3O43395 683 aaKnown RBP20.22■□□□□ 0.83
MUC1-224ENST00000611577 SCG2P13521 617 aa20.22■□□□□ 0.83
MUC1-224ENST00000611577 HOXA13P31271 388 aaPredicted RBP20.22■□□□□ 0.83
MUC1-224ENST00000611577 PTK7Q13308 1070 aa20.22■□□□□ 0.83
MUC1-224ENST00000611577 KIAA0753Q2KHM9 967 aa20.22■□□□□ 0.83
MUC1-224ENST00000611577 TMEM31Q5JXX7 168 aa20.22■□□□□ 0.83
MUC1-224ENST00000611577 WWC2Q6AWC2 1192 aa20.22■□□□□ 0.83
MUC1-224ENST00000611577 FAM117BQ6P1L5 589 aa20.22■□□□□ 0.83
MUC1-224ENST00000611577 FCHSD1Q86WN1 690 aa20.22■□□□□ 0.83
MUC1-224ENST00000611577 EMID1Q96A84 441 aaPredicted RBP20.22■□□□□ 0.83
MUC1-224ENST00000611577 TGS1Q96RS0 853 aaKnown RBP20.22■□□□□ 0.83
MUC1-224ENST00000611577 LINC01553A4QN01 128 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 RBAK-RBAKDNI3L0D1 243 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 EFCAB14O75071 495 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 EIF3JO75822 258 aaKnown RBP20.21■□□□□ 0.83
MUC1-224ENST00000611577 F2P00734 622 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 HSD17B4P51659 736 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 ERVK-21P61565 698 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 LAMC2Q13753 1193 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 IKBKEQ14164 716 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 ME3Q16798 604 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 PFKFB3Q16875 520 aaPredicted RBP20.21■□□□□ 0.83
MUC1-224ENST00000611577 DHX37Q8IY37 1157 aaKnown RBP20.21■□□□□ 0.83
MUC1-224ENST00000611577 PPTC7Q8NI37 304 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 CCDC12Q8WUD4 166 aaPredicted RBP20.21■□□□□ 0.83
MUC1-224ENST00000611577 WNT8BQ93098 351 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 PSTPIP2Q9H939 334 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 SUGCTQ9HAC7 445 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 PXMP2Q9NR77 195 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 KIAA1217Q5T5P2 1943 aa20.21■□□□□ 0.83
MUC1-224ENST00000611577 OPLAHO14841 1288 aa20.2■□□□□ 0.82
MUC1-224ENST00000611577 NR3C2P08235 984 aa20.2■□□□□ 0.82
MUC1-224ENST00000611577 NTRK3Q16288 839 aa20.2■□□□□ 0.82
MUC1-224ENST00000611577 TRIM71Q2Q1W2 868 aaKnown RBP20.2■□□□□ 0.82
MUC1-224ENST00000611577 ZNF618Q5T7W0 954 aa20.2■□□□□ 0.82
MUC1-224ENST00000611577 PPP1R18Q6NYC8 613 aa20.2■□□□□ 0.82
MUC1-224ENST00000611577 TRAF7Q6Q0C0 670 aa20.2■□□□□ 0.82
MUC1-224ENST00000611577 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
MUC1-224ENST00000611577 KHSRPQ92945 711 aaKnown RBP eCLIP20.2■□□□□ 0.82
MUC1-224ENST00000611577 ZSCAN31Q96LW9 406 aaPredicted RBP20.2■□□□□ 0.82
MUC1-224ENST00000611577 UBE2ZQ9H832 354 aaPredicted RBP20.2■□□□□ 0.82
MUC1-224ENST00000611577 BARHL2Q9NY43 387 aa20.2■□□□□ 0.82
MUC1-224ENST00000611577 HAS3O00219 553 aa20.19■□□□□ 0.82
MUC1-224ENST00000611577 SORBS3O60504 671 aa20.19■□□□□ 0.82
MUC1-224ENST00000611577 DEXIO95424 95 aa20.19■□□□□ 0.82
MUC1-224ENST00000611577 LARGE1O95461 756 aa20.19■□□□□ 0.82
MUC1-224ENST00000611577 ADCY7P51828 1080 aa20.19■□□□□ 0.82
MUC1-224ENST00000611577 ZNF200P98182 395 aaPredicted RBP20.19■□□□□ 0.82
MUC1-224ENST00000611577 MBTPS1Q14703 1052 aa20.19■□□□□ 0.82
MUC1-224ENST00000611577 CCDC148Q8NFR7 591 aa20.19■□□□□ 0.82
MUC1-224ENST00000611577 GTF3C6Q969F1 213 aa20.19■□□□□ 0.82
MUC1-224ENST00000611577 FAM86C2PA6NEL3 165 aa20.18■□□□□ 0.82
MUC1-224ENST00000611577 STXBP3O00186 592 aa20.18■□□□□ 0.82
MUC1-224ENST00000611577 LGR5O75473 907 aa20.18■□□□□ 0.82
MUC1-224ENST00000611577 MYCLP12524 364 aaPredicted RBP20.18■□□□□ 0.82
MUC1-224ENST00000611577 GHRHRQ02643 423 aa20.18■□□□□ 0.82
MUC1-224ENST00000611577 GLT8D2Q9H1C3 349 aa20.18■□□□□ 0.82
MUC1-224ENST00000611577 SH2B1Q9NRF2 756 aaPredicted RBP20.18■□□□□ 0.82
MUC1-224ENST00000611577 SMCO2A6NFE2 343 aa20.17■□□□□ 0.82
MUC1-224ENST00000611577 SPDYE3A6NKU9 549 aa20.17■□□□□ 0.82
MUC1-224ENST00000611577 USP17L6PQ6QN14 398 aa20.17■□□□□ 0.82
MUC1-224ENST00000611577 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.17■□□□□ 0.82
MUC1-224ENST00000611577 PDCD2LQ9BRP1 358 aa20.17■□□□□ 0.82
MUC1-224ENST00000611577 EHMT1Q9H9B1 1298 aa20.17■□□□□ 0.82
MUC1-224ENST00000611577 C6orf50Q9HD87 102 aa20.17■□□□□ 0.82
MUC1-224ENST00000611577 SIP14410 1827 aa20.17■□□□□ 0.82
MUC1-224ENST00000611577 AMHP03971 560 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 HOXD8P13378 290 aaPredicted RBP20.16■□□□□ 0.82
MUC1-224ENST00000611577 XBP1P17861 261 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 KCNA5P22460 613 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 HOXD11P31277 338 aaPredicted RBP20.16■□□□□ 0.82
MUC1-224ENST00000611577 THPOP40225 353 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 HIC1Q14526 733 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 PKN1Q16512 942 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 UBE2SQ16763 222 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 CCDC83Q8IWF9 413 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 MYOCDQ8IZQ8 938 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 FBXO22Q8NEZ5 403 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 WASF1Q92558 559 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 SPATA33Q96N06 139 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 C17orf80Q9BSJ5 609 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 CD320Q9NPF0 282 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 RIC8AQ9NPQ8 531 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 C11orf16Q9NQ32 467 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 VPS54Q9P1Q0 977 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 ARIH1Q9Y4X5 557 aaPredicted RBP20.16■□□□□ 0.82
MUC1-224ENST00000611577 INSL6Q9Y581 213 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
MUC1-224ENST00000611577 PIK3CDO00329 1044 aa20.15■□□□□ 0.82
MUC1-224ENST00000611577 GPR37L1O60883 481 aa20.15■□□□□ 0.82
MUC1-224ENST00000611577 PPFIA4O75335 1185 aa20.15■□□□□ 0.82
MUC1-224ENST00000611577 RGS20O76081 388 aa20.15■□□□□ 0.82
MUC1-224ENST00000611577 GGPS1O95749 300 aa20.15■□□□□ 0.82
MUC1-224ENST00000611577 GNA11P29992 359 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms