RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ECE1P42892 770 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 TFAMQ00059 246 aaKnown RBP7.95□□□□□ -1.14
CSDE1-218ENST00000610726 COASYQ13057 564 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 LLGL1Q15334 1064 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 CCDC144BQ3MJ40 725 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 RNF187Q5TA31 235 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ZNF365Q70YC5 407 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ZBTB33Q86T24 672 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ZNF668Q96K58 619 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-218ENST00000610726 TMEM206Q9H813 350 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ELP3Q9H9T3 547 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 OPA1O60313 960 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 MXI1P50539 228 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 PDE6CP51160 858 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ZBED6P86452 979 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 SEC23AQ15436 765 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 LRP10Q7Z4F1 713 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 NBPF11Q86T75 865 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 SYCE1Q8N0S2 351 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 RETREG2Q8NC44 543 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ATRIPQ8WXE1 791 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ADAMTS1Q9UHI8 967 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 MAD2L2Q9UI95 211 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 PVALEFA0A1B0GWK0 134 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 EZRP15311 586 aaKnown RBP7.95□□□□□ -1.14
CSDE1-218ENST00000610726 EIF4A3P38919 411 aaKnown RBP7.95□□□□□ -1.14
CSDE1-218ENST00000610726 PIK3CAP42336 1068 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 CXCL9Q07325 125 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 BAATQ14032 418 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ZRSR2Q15696 482 aaKnown RBP7.95□□□□□ -1.14
CSDE1-218ENST00000610726 GRIK5Q16478 980 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 SWSAP1Q6NVH7 229 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 SARM1Q6SZW1 724 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 HDXQ7Z353 690 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 CCDC105Q8IYK2 499 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 MB21D1Q8N884 522 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 RNF34Q969K3 372 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 LXNQ9BS40 222 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 TBC1D22BQ9NU19 505 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 FBXO40Q9UH90 709 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ASIC3Q9UHC3 531 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 IFT172Q9UG01 1749 aa7.95□□□□□ -1.14
CSDE1-218ENST00000610726 ZEB2O60315 1214 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 IL1R1P14778 569 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 QARSP47897 775 aaKnown RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 COG2Q14746 738 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 NAA35Q5VZE5 725 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 RASGRP2Q7LDG7 609 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 C2orf69Q8N8R5 385 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 ZDHHC15Q96MV8 337 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 EIF2AK1Q9BQI3 630 aaKnown RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 TRIM9Q9C026 710 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 ZMYND12Q9H0C1 365 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 ACAD9Q9H845 621 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 GABBR1Q9UBS5 961 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 PNMA3Q9UL41 463 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 GOLGA6L7A0A1B0GV03 622 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 SLC16A4O15374 487 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 LACTBP83111 547 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 HDLBPQ00341 1268 aaKnown RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 ST3GAL1Q11201 340 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 COL9A3Q14050 684 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 TFDP1Q14186 410 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 KIF22Q14807 665 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 NBPF9Q3BBW0 867 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 MRRFQ96E11 262 aaKnown RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 CCSER1Q9C0I3 900 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 FAM49AQ9H0Q0 323 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 UBE2TQ9NPD8 197 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 NXF1Q9UBU9 619 aaKnown RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 P4HBP07237 508 aaKnown RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 P4HA1P13674 534 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 PTK2Q05397 1052 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 NTRK3Q16288 839 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 LONRF2Q1L5Z9 754 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 DHX40Q8IX18 779 aaKnown RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 ZNF280CQ8ND82 737 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 AGBL1Q96MI9 1066 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 JPH2Q9BR39 696 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 AP5M1Q9H0R1 490 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 HACL1Q9UJ83 578 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 PALM3A6NDB9 673 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 PLSCR1O15162 318 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 MFAP3LO75121 409 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 NDUFA10O95299 355 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 CAPN2P17655 700 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 KRT76Q01546 638 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 SND1Q7KZF4 910 aaKnown RBP eCLIP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 CCDC91Q7Z6B0 441 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 THNSL1Q8IYQ7 743 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 AGBL3Q8NEM8 1001 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 DPF2Q92785 391 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 ZKSCAN4Q969J2 545 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 PSMD1Q99460 953 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 SELENOSQ9BQE4 189 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 TSKSQ9UJT2 592 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 UTP11Q9Y3A2 253 aaKnown RBP7.94□□□□□ -1.14
CSDE1-218ENST00000610726 HYOU1Q9Y4L1 999 aa7.94□□□□□ -1.14
CSDE1-218ENST00000610726 NPHP3-ACAD11A0A0J9YXS1 232 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms