RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 CLCN6P51797 869 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 AKAP17AQ02040 695 aaKnown RBP11.41□□□□□ -0.58
CTSA-215ENST00000607187 FPGSQ05932 587 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 AP3B2Q13367 1082 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 NLRX1Q86UT6 975 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 SESTD1Q86VW0 696 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 CCDC12Q8WUD4 166 aaPredicted RBP11.41□□□□□ -0.58
CTSA-215ENST00000607187 CDHR1Q96JP9 859 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 KATNAL1Q9BW62 490 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 PPP1R12CQ9BZL4 782 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 HIPK3Q9H422 1215 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 EHMT1Q9H9B1 1298 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 JADE2Q9NQC1 790 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 ADGRG1Q9Y653 693 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 SCN5AQ14524 2016 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 TET1Q8NFU7 2136 aa11.41□□□□□ -0.58
CTSA-215ENST00000607187 TANC1Q9C0D5 1861 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 HAS3O00219 553 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 MAFGO15525 162 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 ATP9AO75110 1047 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 PPFIA3O75145 1194 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 ZNF286BP0CG31 522 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 KCNA2P16389 499 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 CYP2C18P33260 490 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 SREBF1P36956 1147 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 EPHB4P54760 987 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 STK3Q13188 491 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 MTMR1Q13613 665 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 SHHQ15465 462 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 C8orf34Q49A92 452 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 TMEM259Q4ZIN3 620 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 FAM47CQ5HY64 1035 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 C9orf50Q5SZB4 431 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 CYFIP1Q7L576 1253 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 TRIM22Q8IYM9 498 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 GIMAP8Q8ND71 665 aaPredicted RBP11.4□□□□□ -0.58
CTSA-215ENST00000607187 PPP1R13LQ8WUF5 828 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 PGBD1Q96JS3 809 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 C16orf70Q9BSU1 422 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 NOC4LQ9BVI4 516 aaKnown RBP11.4□□□□□ -0.58
CTSA-215ENST00000607187 ANO3Q9BYT9 981 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 C6orf50Q9HD87 102 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 TMEM260Q9NX78 707 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 TPCN1Q9ULQ1 816 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 WDR81Q562E7 1941 aa11.4□□□□□ -0.58
CTSA-215ENST00000607187 UMODL1Q5DID0 1318 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 NOP56O00567 594 aaKnown RBP11.39□□□□□ -0.59
CTSA-215ENST00000607187 CPLX1O14810 134 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 ADAMTS3O15072 1205 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 CYP2C9P11712 490 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 CSF2RAP15509 400 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 GNA11P29992 359 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 PSEN2P49810 448 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 AK2P54819 239 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 CHMP4BP1P59074 171 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 SSRP1Q08945 709 aaKnown RBP11.39□□□□□ -0.59
CTSA-215ENST00000607187 SCRN1Q12765 414 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 PPIGQ13427 754 aaKnown RBP eCLIP11.39□□□□□ -0.59
CTSA-215ENST00000607187 ANKRD1Q15327 319 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 KIAA0753Q2KHM9 967 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 JAKMIP3Q5VZ66 844 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 MCTP2Q6DN12 878 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 GDF6Q6KF10 455 aaPredicted RBP11.39□□□□□ -0.59
CTSA-215ENST00000607187 TMEM199Q8N511 208 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 CCDC148Q8NFR7 591 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 CYP2W1Q8TAV3 490 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 CRYGNQ8WXF5 182 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 LRCH3Q96II8 777 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 GPR20Q99678 358 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 MXRA8Q9BRK3 442 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 WNT8AQ9H1J5 351 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 SLKQ9H2G2 1235 aaPredicted RBP11.39□□□□□ -0.59
CTSA-215ENST00000607187 SH3GLB2Q9NR46 395 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 GTF2IRD1Q9UHL9 959 aa11.39□□□□□ -0.59
CTSA-215ENST00000607187 MYH9P35579 1960 aaKnown RBP11.39□□□□□ -0.59
CTSA-215ENST00000607187 MYO9BQ13459 2157 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 H3BRB1 525 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 PFKFB2O60825 505 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 DEXIO95424 95 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 LGALS2P05162 132 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 ARHGAP4P98171 946 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 PTGISQ16647 500 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 CEP55Q53EZ4 464 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 PPP2R2DQ66LE6 453 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 GPR153Q6NV75 609 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
CTSA-215ENST00000607187 C16orf59Q7L2K0 433 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 REXO1Q8N1G1 1221 aaKnown RBP11.38□□□□□ -0.59
CTSA-215ENST00000607187 C7orf31Q8N865 590 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 BICD2Q8TD16 824 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 CTAGE1Q96RT6 745 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 ALG1Q9BT22 464 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 TUT1Q9H6E5 874 aaKnown RBP11.38□□□□□ -0.59
CTSA-215ENST00000607187 KCNH7Q9NS40 1196 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 VPS54Q9P1Q0 977 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 HDAC6Q9UBN7 1215 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 LIMD1Q9UGP4 676 aa11.38□□□□□ -0.59
CTSA-215ENST00000607187 TELO2Q9Y4R8 837 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms