RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 COL20A1Q9P218 1284 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 WRAP73Q9P2S5 460 aaPredicted RBP17.6■□□□□ 0.41
CTSA-214ENST00000606788 SAMM50Q9Y512 469 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 LRRC53A6NM62 1247 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 MYCLP12524 364 aaPredicted RBP17.6■□□□□ 0.41
CTSA-214ENST00000606788 EIF2AK2P19525 551 aaKnown RBP17.6■□□□□ 0.41
CTSA-214ENST00000606788 NMT1P30419 496 aaKnown RBP17.6■□□□□ 0.41
CTSA-214ENST00000606788 ERMNQ8TAM6 284 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 CHURC1Q8WUH1 139 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 DEF6Q9H4E7 631 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 ST7Q9NRC1 585 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 ARFGEF1Q9Y6D6 1849 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 GOLGA6L9A6NEM1 432 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 NPM3O75607 178 aaKnown RBP17.59■□□□□ 0.41
CTSA-214ENST00000606788 GIT2Q14161 759 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 TDRD12Q587J7 1177 aaKnown RBP17.59■□□□□ 0.41
CTSA-214ENST00000606788 NSMFQ6X4W1 530 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 CCDC51Q96ER9 411 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 GLT8D2Q9H1C3 349 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 MRFAP1Q9Y605 127 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 GREB1LQ9C091 1923 aaPredicted RBP17.59■□□□□ 0.41
CTSA-214ENST00000606788 RHOXF2BP0C7M4 288 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 ACTN1P12814 892 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 NR2F2P24468 414 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 SPP2Q13103 211 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 RHOXF2Q9BQY4 288 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 ZNF577Q9BSK1 485 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 WDR11Q9BZH6 1224 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 CGNQ9P2M7 1197 aaKnown RBP17.59■□□□□ 0.41
CTSA-214ENST00000606788 VAV3Q9UKW4 847 aa17.59■□□□□ 0.41
CTSA-214ENST00000606788 IGLV3-22A0A075B6J6 115 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 TADA3O75528 432 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 FOSP01100 380 aaPredicted RBP17.58■□□□□ 0.41
CTSA-214ENST00000606788 MAP3K9P80192 1104 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 TRIM14Q14142 442 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 MAN2A1Q16706 1144 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 PTPROQ16827 1216 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 MUM1L1Q5H9M0 696 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 BTNL9Q6UXG8 535 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 RDH13Q8NBN7 331 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 PCDHB13Q9Y5F0 798 aa17.58■□□□□ 0.41
CTSA-214ENST00000606788 CYP3A7-CYP3A51PA0A087WV96 503 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 A0A1W2PQC6 194 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 CYP3A7P24462 503 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 EPS15P42566 896 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 CASP4P49662 377 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 CLCN6P51797 869 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 POLR2FP61218 127 aaKnown RBP17.58■□□□□ 0.4
CTSA-214ENST00000606788 EHHADHQ08426 723 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 CCDC42Q96M95 316 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 DNAJC7Q99615 494 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 LSM14BQ9BX40 385 aaKnown RBP17.58■□□□□ 0.4
CTSA-214ENST00000606788 HACL1Q9UJ83 578 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 COL4A3BPQ9Y5P4 624 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 ASNSP08243 561 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 RPA1P27694 616 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 MRPS25P82663 173 aaKnown RBP17.58■□□□□ 0.4
CTSA-214ENST00000606788 FKBP3Q00688 224 aaKnown RBP17.58■□□□□ 0.4
CTSA-214ENST00000606788 MYCT1Q8N699 235 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 ZNF397Q8NF99 534 aaPredicted RBP17.58■□□□□ 0.4
CTSA-214ENST00000606788 TTYH3Q9C0H2 523 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 ZNF446Q9NWS9 450 aa17.58■□□□□ 0.4
CTSA-214ENST00000606788 CNOT7Q9UIV1 285 aaKnown RBP17.58■□□□□ 0.4
CTSA-214ENST00000606788 CTAGE9A4FU28 777 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 TBCAO75347 108 aaKnown RBP17.57■□□□□ 0.4
CTSA-214ENST00000606788 EIF4A3P38919 411 aaKnown RBP17.57■□□□□ 0.4
CTSA-214ENST00000606788 PRELPP51888 382 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 COG2Q14746 738 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 KCTD19Q17RG1 926 aaPredicted RBP17.57■□□□□ 0.4
CTSA-214ENST00000606788 DEFB129Q9H1M3 183 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTSA-214ENST00000606788 ZNF263O14978 683 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 IPO7O95373 1038 aaKnown RBP17.57■□□□□ 0.4
CTSA-214ENST00000606788 ZBED6P86452 979 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 Q4G0T1 1027 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 MTERF4Q7Z6M4 381 aaKnown RBP17.57■□□□□ 0.4
CTSA-214ENST00000606788 JAKMIP2Q96AA8 810 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 MLXIPQ9HAP2 919 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 ARHGAP20Q9P2F6 1191 aa17.57■□□□□ 0.4
CTSA-214ENST00000606788 CTDP1Q9Y5B0 961 aaPredicted RBP17.57■□□□□ 0.4
CTSA-214ENST00000606788 AKR1B10O60218 316 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 PNMA6AP0CW24 399 aaPredicted RBP17.56■□□□□ 0.4
CTSA-214ENST00000606788 KCNMA1Q12791 1236 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 CEP55Q53EZ4 464 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 AGBL3Q8NEM8 1001 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 LRRC27Q9C0I9 530 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 UNC45AQ9H3U1 944 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 SIK3Q9Y2K2 1263 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 PCDHA2Q9Y5H9 948 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 SLITRK3O94933 977 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 LRRC63Q05C16 580 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 OTOP1Q7RTM1 612 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 NEK11Q8NG66 645 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 ITGB5P18084 799 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 GFPT1Q06210 699 aaPredicted RBP17.56■□□□□ 0.4
CTSA-214ENST00000606788 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
CTSA-214ENST00000606788 RANBP17Q9H2T7 1088 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms