RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 DTHD1Q6ZMT9 781 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 GIMAP8Q8ND71 665 aaPredicted RBP8.66□□□□□ -1.02
MSH6-211ENST00000606499 KCNG4Q8TDN1 519 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 AFG1LQ8WV93 481 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 EMID1Q96A84 441 aaPredicted RBP8.66□□□□□ -1.02
MSH6-211ENST00000606499 ARMC5Q96C12 935 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 SPATA33Q96N06 139 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 CLIC6Q96NY7 704 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 GPR20Q99678 358 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 SCAND2PQ9GZW5 306 aaPredicted RBP8.66□□□□□ -1.02
MSH6-211ENST00000606499 PAK6Q9NQU5 681 aaPredicted RBP8.66□□□□□ -1.02
MSH6-211ENST00000606499 TCEAL9Q9UHQ7 104 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 RCOR1Q9UKL0 485 aa8.66□□□□□ -1.02
MSH6-211ENST00000606499 GSTTP1A0A1W2PQM5 241 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 WDR64B1ANS9 1081 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 NOP56O00567 594 aaKnown RBP8.65□□□□□ -1.02
MSH6-211ENST00000606499 CTAGE5O15320 804 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 PPP6R2O75170 966 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 ADAMTS4O75173 837 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 MMP3P08254 477 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 C6orf222P0C671 652 aaPredicted RBP8.65□□□□□ -1.02
MSH6-211ENST00000606499 CDC25AP30304 524 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 TCF7P36402 384 aaPredicted RBP8.65□□□□□ -1.02
MSH6-211ENST00000606499 GJA9P57773 515 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 UGCGQ16739 394 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 SPECC1Q5M775 1068 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 ZNF746Q6NUN9 644 aaPredicted RBP8.65□□□□□ -1.02
MSH6-211ENST00000606499 USP49Q70CQ1 688 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 MIER3Q7Z3K6 550 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 TRIM50Q86XT4 487 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 IGSF22Q8N9C0 903 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 KRI1Q8N9T8 703 aaKnown RBP8.65□□□□□ -1.02
MSH6-211ENST00000606499 PPTC7Q8NI37 304 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 FERMT2Q96AC1 680 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 DEFB118Q96PH6 123 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 AP5M1Q9H0R1 490 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 RNF208Q9H0X6 261 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 CSRNP2Q9H175 543 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 UPF3AQ9H1J1 476 aaKnown RBP8.65□□□□□ -1.02
MSH6-211ENST00000606499 LRWD1Q9UFC0 647 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 PCDHA7Q9UN72 937 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 SAMM50Q9Y512 469 aa8.65□□□□□ -1.02
MSH6-211ENST00000606499 SRPRBQ9Y5M8 271 aaKnown RBP8.65□□□□□ -1.02
MSH6-211ENST00000606499 MORC2Q9Y6X9 1032 aaPredicted RBP8.65□□□□□ -1.02
MSH6-211ENST00000606499 TNRC18O15417 2968 aaPredicted RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 A6NJR5 290 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 MSCO60682 206 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 CUTAO60888 179 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 SUPT20HL2P0C7V6 817 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 ZNF286BP0CG31 522 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 SFNP31947 248 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 LONP1P36776 959 aaKnown RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 CPT1AP50416 773 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 JAK3P52333 1124 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 CYP4A11Q02928 519 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 FSCN1Q16658 493 aaKnown RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 AXDND1Q5T1B0 1012 aaPredicted RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 COL13A1Q5TAT6 717 aaPredicted RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 ABHD15Q6UXT9 468 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 CLEC17AQ6ZS10 378 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 CCDC60Q8IWA6 550 aaPredicted RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 SMAP1Q8IYB5 467 aaPredicted RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 BANK1Q8NDB2 785 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 SNX29Q8TEQ0 813 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 DYDC2Q96IM9 177 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 EPSTI1Q96J88 318 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 MMTAG2Q9BU76 263 aaKnown RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 RAB34Q9BZG1 259 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 DISC1Q9NRI5 854 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 Q9Y3F1 56 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 MYH9P35579 1960 aaKnown RBP8.64□□□□□ -1.03
MSH6-211ENST00000606499 LOXHD1Q8IVV2 1947 aa8.64□□□□□ -1.03
MSH6-211ENST00000606499 EMSYQ7Z589 1322 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 IGSF9BQ9UPX0 1349 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 IGKV6D-21A0A0A0MT36 114 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 POTEB3A0JP26 581 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 BACH1O14867 736 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 GADD45BO75293 160 aaPredicted RBP8.63□□□□□ -1.03
MSH6-211ENST00000606499 MED24O75448 989 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 ATG7O95352 703 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 LGALS2P05162 132 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 PSAPP07602 524 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 MYL3P08590 195 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 HOXD8P13378 290 aaPredicted RBP8.63□□□□□ -1.03
MSH6-211ENST00000606499 CACNB1Q02641 598 aaPredicted RBP8.63□□□□□ -1.03
MSH6-211ENST00000606499 PDIA5Q14554 519 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 LRRC41Q15345 812 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 GNASQ5JWF2 1037 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 UTP14CQ5TAP6 766 aaKnown RBP8.63□□□□□ -1.03
MSH6-211ENST00000606499 SWSAP1Q6NVH7 229 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 MIS18BP1Q6P0N0 1132 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 POTEBQ6S5H4 581 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 SHC4Q6S5L8 630 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 CABP7Q86V35 215 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 PPP1R13LQ8WUF5 828 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 SEPT1Q8WYJ6 367 aa8.63□□□□□ -1.03
MSH6-211ENST00000606499 SYMPKQ92797 1274 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms