RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 TRIM43Q96BQ3 446 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-211ENST00000605457 UIMC1Q96RL1 719 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 TUT1Q9H6E5 874 aaKnown RBP16.12■□□□□ 0.17
TUBE1-211ENST00000605457 PRDM5Q9NQX1 630 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-211ENST00000605457 TBX21Q9UL17 535 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 KIF3AQ9Y496 699 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 KIAA0355O15063 1070 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 GCFC2P16383 781 aaKnown RBP16.12■□□□□ 0.17
TUBE1-211ENST00000605457 CHMP4BP1P59074 171 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 ACTR2P61160 394 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 PTPN11Q06124 597 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-211ENST00000605457 SAFBQ15424 915 aaKnown RBP eCLIP16.12■□□□□ 0.17
TUBE1-211ENST00000605457 LETM2Q2VYF4 491 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 FAM47CQ5HY64 1035 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 TRPV6Q9H1D0 765 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 TBC1D22BQ9NU19 505 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 TRMT13Q9NUP7 481 aaKnown RBP16.12■□□□□ 0.17
TUBE1-211ENST00000605457 PRKAG2Q9UGJ0 569 aa16.12■□□□□ 0.17
TUBE1-211ENST00000605457 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.12■□□□□ 0.17
TUBE1-211ENST00000605457 EMSYQ7Z589 1322 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 DDX39AO00148 427 aaKnown RBP16.11■□□□□ 0.17
TUBE1-211ENST00000605457 SLC37A4O43826 429 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 CCNE2O96020 404 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 GJB2P29033 226 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 UTP14CQ5TAP6 766 aaKnown RBP16.11■□□□□ 0.17
TUBE1-211ENST00000605457 PPP4R3AQ6IN85 833 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 SLC5A5Q92911 643 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 FOXP1Q9H334 677 aaPredicted RBP16.11■□□□□ 0.17
TUBE1-211ENST00000605457 TMEM39AQ9NV64 488 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 HDAC6Q9UBN7 1215 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 DDX25Q9UHL0 483 aaKnown RBP16.11■□□□□ 0.17
TUBE1-211ENST00000605457 GTF2IRD1Q9UHL9 959 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 ZNF215Q9UL58 517 aaPredicted RBP16.11■□□□□ 0.17
TUBE1-211ENST00000605457 SCN5AQ14524 2016 aa16.11■□□□□ 0.17
TUBE1-211ENST00000605457 LGR5O75473 907 aa16.1■□□□□ 0.17
TUBE1-211ENST00000605457 ATG7O95352 703 aa16.1■□□□□ 0.17
TUBE1-211ENST00000605457 ITGB8P26012 769 aa16.1■□□□□ 0.17
TUBE1-211ENST00000605457 C7orf31Q8N865 590 aa16.1■□□□□ 0.17
TUBE1-211ENST00000605457 ETNPPLQ8TBG4 499 aa16.1■□□□□ 0.17
TUBE1-211ENST00000605457 PCYT2Q99447 389 aa16.1■□□□□ 0.17
TUBE1-211ENST00000605457 RIT2Q99578 217 aa16.1■□□□□ 0.17
TUBE1-211ENST00000605457 SMC3Q9UQE7 1217 aa16.1■□□□□ 0.17
TUBE1-211ENST00000605457 K7ELQ4 463 aaPredicted RBP16.09■□□□□ 0.17
TUBE1-211ENST00000605457 CCNT1O60563 726 aaKnown RBP16.09■□□□□ 0.17
TUBE1-211ENST00000605457 MAGEA10P43363 369 aaPredicted RBP16.09■□□□□ 0.17
TUBE1-211ENST00000605457 GDF6Q6KF10 455 aaPredicted RBP16.09■□□□□ 0.17
TUBE1-211ENST00000605457 ZNF746Q6NUN9 644 aaPredicted RBP16.09■□□□□ 0.17
TUBE1-211ENST00000605457 SNX21Q969T3 373 aa16.09■□□□□ 0.17
TUBE1-211ENST00000605457 CTAGE1Q96RT6 745 aa16.09■□□□□ 0.17
TUBE1-211ENST00000605457 NAP1L4Q99733 375 aaKnown RBP16.09■□□□□ 0.17
TUBE1-211ENST00000605457 GDF15Q99988 308 aa16.09■□□□□ 0.17
TUBE1-211ENST00000605457 EVPLQ92817 2033 aa16.09■□□□□ 0.17
TUBE1-211ENST00000605457 IGKV6D-21A0A0A0MT36 114 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 GAS7O60861 476 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 PSMD10O75832 226 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 SUPT20HL2P0C7V6 817 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 HOXC8P31273 242 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 KRT76Q01546 638 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.17
TUBE1-211ENST00000605457 LRCH2Q5VUJ6 765 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 ABHD15Q6UXT9 468 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 GJA10Q969M2 543 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 PRO3102Q9H379 93 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 SMARCAD1Q9H4L7 1026 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 KCNMB3Q9NPA1 279 aa16.08■□□□□ 0.17
TUBE1-211ENST00000605457 KIF28PB7ZC32 967 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 WNT7AO00755 349 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 SMIM10L2AP0DMW4 78 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 SMIM10L2BP0DMW5 78 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 RAG1P15918 1043 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
TUBE1-211ENST00000605457 HIC1Q14526 733 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 PTGISQ16647 500 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 CHRDL2Q6WN34 429 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 NOSTRINQ8IVI9 506 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 SMAP1Q8IYB5 467 aaPredicted RBP16.08■□□□□ 0.16
TUBE1-211ENST00000605457 TET1Q8NFU7 2136 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 GLG1Q92896 1179 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 TEKT3Q9BXF9 490 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 ERAP1Q9NZ08 941 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 TCEAL9Q9UHQ7 104 aa16.08■□□□□ 0.16
TUBE1-211ENST00000605457 TIMP1P01033 207 aa16.07■□□□□ 0.16
TUBE1-211ENST00000605457 CYP2C9P11712 490 aa16.07■□□□□ 0.16
TUBE1-211ENST00000605457 U2AF2P26368 475 aaKnown RBP eCLIP16.07■□□□□ 0.161e-7■■■■■ 32.1
TUBE1-211ENST00000605457 CCDC60Q8IWA6 550 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-211ENST00000605457 BADQ92934 168 aa16.07■□□□□ 0.16
TUBE1-211ENST00000605457 LBHD1Q9BQE6 289 aaPredicted RBP16.07■□□□□ 0.16
TUBE1-211ENST00000605457 NOC4LQ9BVI4 516 aaKnown RBP16.07■□□□□ 0.16
TUBE1-211ENST00000605457 PPP1R12CQ9BZL4 782 aa16.07■□□□□ 0.16
TUBE1-211ENST00000605457 HIPK3Q9H422 1215 aa16.07■□□□□ 0.16
TUBE1-211ENST00000605457 RNPEPQ9H4A4 650 aa16.07■□□□□ 0.16
TUBE1-211ENST00000605457 AZI2Q9H6S1 392 aa16.07■□□□□ 0.16
TUBE1-211ENST00000605457 LOXHD1Q8IVV2 1947 aa16.06■□□□□ 0.16
TUBE1-211ENST00000605457 TBX3O15119 743 aa16.06■□□□□ 0.16
TUBE1-211ENST00000605457 MARK3P27448 753 aa16.06■□□□□ 0.16
TUBE1-211ENST00000605457 STAT5BP51692 787 aa16.06■□□□□ 0.16
TUBE1-211ENST00000605457 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
TUBE1-211ENST00000605457 MIS18BP1Q6P0N0 1132 aa16.06■□□□□ 0.16
TUBE1-211ENST00000605457 B3GNT9Q6UX72 402 aa16.06■□□□□ 0.16
TUBE1-211ENST00000605457 PLPPR4Q7Z2D5 763 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms