RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 KRIT1O00522 736 aa13.61□□□□□ -0.23
CDCA3-212ENST00000604599 KIF4AO95239 1232 aa13.61□□□□□ -0.23
CDCA3-212ENST00000604599 AP1ARQ63HQ0 302 aa13.61□□□□□ -0.23
CDCA3-212ENST00000604599 FAM133AQ8N9E0 248 aa13.61□□□□□ -0.23
CDCA3-212ENST00000604599 EIF1ADQ8N9N8 165 aaKnown RBP13.61□□□□□ -0.23
CDCA3-212ENST00000604599 YIPF3Q9GZM5 350 aa13.61□□□□□ -0.23
CDCA3-212ENST00000604599 CNOT10Q9H9A5 744 aaKnown RBP13.61□□□□□ -0.23
CDCA3-212ENST00000604599 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
CDCA3-212ENST00000604599 ALS2Q96Q42 1657 aa13.61□□□□□ -0.23
CDCA3-212ENST00000604599 A0A0G2JS52 829 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 TLDC2A0PJX2 215 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 IFNAR2P48551 515 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 TRPM8Q7Z2W7 1104 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 NLRP10Q86W26 655 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 SPICE1Q8N0Z3 855 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 C7orf25Q9BPX7 421 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 LSM14BQ9BX40 385 aaKnown RBP13.6□□□□□ -0.23
CDCA3-212ENST00000604599 SAMD15Q9P1V8 674 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
CDCA3-212ENST00000604599 ANAPC4Q9UJX5 808 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 CD2APQ9Y5K6 639 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 A8MUI8 341 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 PGRMC1O00264 195 aaKnown RBP13.6□□□□□ -0.23
CDCA3-212ENST00000604599 NOL4O94818 638 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 SHBGP04278 402 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 GSTA1P08263 222 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 VIMP08670 466 aaKnown RBP13.6□□□□□ -0.23
CDCA3-212ENST00000604599 DYNLL1P63167 89 aaKnown RBP13.6□□□□□ -0.23
CDCA3-212ENST00000604599 RIPK1Q13546 671 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 LRRC41Q15345 812 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 GLIS3Q8NEA6 775 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 ACSBG1Q96GR2 724 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 CEP72Q9P209 647 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 MTMR7Q9Y216 660 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
CDCA3-212ENST00000604599 UPP2O95045 317 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 PPP1R2P41236 205 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 ALDH5A1P51649 535 aaPredicted RBP13.6□□□□□ -0.23
CDCA3-212ENST00000604599 KLHL30Q0D2K2 578 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 SEMA3FQ13275 785 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 MIS18BP1Q6P0N0 1132 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
CDCA3-212ENST00000604599 TLCD1Q96CP7 247 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 SH3GL3Q99963 347 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 TRIM51Q9BSJ1 452 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 FAM167BQ9BTA0 163 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 CUEDC2Q9H467 287 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
CDCA3-212ENST00000604599 UBOX5O94941 541 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 TECP42680 631 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 USP11P51784 963 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 LRRC55Q6ZSA7 311 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 KIF2BQ8N4N8 673 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 METTL13Q8N6R0 699 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 MYH3P11055 1940 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 PLCH1Q4KWH8 1693 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 CFAP73A6NFT4 308 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 AP1G2O75843 785 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 ZNF268Q14587 947 aaPredicted RBP13.59□□□□□ -0.23
CDCA3-212ENST00000604599 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 ERICH1Q86X53 443 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 ATXN2LQ8WWM7 1075 aaKnown RBP13.59□□□□□ -0.23
CDCA3-212ENST00000604599 PRMT1Q99873 361 aaKnown RBP13.59□□□□□ -0.23
CDCA3-212ENST00000604599 MAGEF1Q9HAY2 307 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 STK38LQ9Y2H1 464 aa13.59□□□□□ -0.23
CDCA3-212ENST00000604599 NQO1P15559 274 aaKnown RBP13.58□□□□□ -0.24
CDCA3-212ENST00000604599 AMPD3Q01432 767 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 ITIH4Q14624 930 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 LETM2Q2VYF4 491 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 MAEAQ7L5Y9 396 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 PIGWQ7Z7B1 504 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 AFF2P51816 1311 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 MROH5Q6ZUA9 1318 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 USP17L12C9JPN9 530 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 USP17L21D6R901 530 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 IGF2BP3O00425 579 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDCA3-212ENST00000604599 THEMIS2Q5TEJ8 643 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
CDCA3-212ENST00000604599 HEATR3Q7Z4Q2 680 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 ACTRT1Q8TDG2 376 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 NLRP3Q96P20 1036 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 FMO2Q99518 471 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDCA3-212ENST00000604599 SLC5A4Q9NY91 659 aa13.58□□□□□ -0.24
CDCA3-212ENST00000604599 KLHL33A6NCF5 533 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 MYMKA6NI61 221 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 ASAP2O43150 1006 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 FGFR1OPO95684 399 aaKnown RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 OR52Z1P0C646 297 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 NCALDP61601 193 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 ICA1Q05084 483 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 UHMK1Q8TAS1 419 aaKnown RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 PBKQ96KB5 322 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 CALR3Q96L12 384 aaKnown RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 ADAM7Q9H2U9 754 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 KCNMB3Q9NPA1 279 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms