RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SPTLC1O15269 473 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 LMNAP02545 664 aaKnown RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 EVA1CP58658 441 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 DSTNP60981 165 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 CAMK4Q16566 473 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 BBS9Q3SYG4 887 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 SH3D19Q5HYK7 790 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 PPP2R2DQ66LE6 453 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 HDGFL2Q7Z4V5 671 aaPredicted RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 TMEM151BQ8IW70 566 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 GALNT6Q8NCL4 622 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 ATRIPQ8WXE1 791 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 PEX13Q92968 403 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 ABTB1Q969K4 478 aaPredicted RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 PANX2Q96RD6 677 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 RASAL2Q9UJF2 1139 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 AGAP1Q9UPQ3 857 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 PNPLA6Q8IY17 1366 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 CEMIPQ8WUJ3 1361 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 IQANK1A0A1B0GTG1 560 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 E7EVH7 732 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 HSF2BPO75031 334 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 GLRX3O76003 335 aaKnown RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 NR1D1P20393 614 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 TNFRSF8P28908 595 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 HMOX2P30519 316 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 CSTF2P33240 577 aaKnown RBP eCLIP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 TMED10P49755 219 aaKnown RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 RELAQ04206 551 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 NIPAL4Q0D2K0 466 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 NMIQ13287 307 aaPredicted RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 DCTN2Q13561 401 aaKnown RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 INSCQ1MX18 579 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 TAOK1Q7L7X3 1001 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 PNMA8AQ86V59 439 aaPredicted RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 CCDC83Q8IWF9 413 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 LSMEM1Q8N8F7 131 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 NGDNQ8NEJ9 315 aaKnown RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 CAVIN3Q969G5 261 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 FAM129AQ9BZQ8 928 aa9.62□□□□□ -0.87
COMMD3-215ENST00000602574 RPL26L1Q9UNX3 145 aaKnown RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
COMMD3-215ENST00000602574 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 OVOS2A0A0G2JMS6 1433 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 OVOS2A0A0J9YW53 1432 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ZCCHC11Q5TAX3 1644 aaKnown RBP9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ARPC4-TTLL3A0A0A6YYG9 625 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 TMEM114B3SHH9 223 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 IKBKBO14920 756 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 LDHCP07864 332 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 CES1P23141 567 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 PSMA3P25788 255 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 LAPTM5Q13571 262 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 NEUROD2Q15784 382 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 RASIP1Q5U651 963 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 OTUD7BQ6GQQ9 843 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 EMBQ6PCB8 327 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ENDOVQ8N8Q3 282 aaKnown RBP9.61□□□□□ -0.87
COMMD3-215ENST00000602574 OR7G1Q8NGA0 311 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ATL1Q8WXF7 558 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 JPH4Q96JJ6 628 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 AIFM2Q9BRQ8 373 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 GABBR1Q9UBS5 961 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 SLC45A1Q9Y2W3 748 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ZFYVE16Q7Z3T8 1539 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 PDS5AQ29RF7 1337 aaKnown RBP9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ABCC12Q96J65 1359 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ZFYVE9O95405 1425 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 H0Y3Z8 333 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 KPNA6O60684 536 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ALAS1P13196 640 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 CTRB1P17538 263 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 CACNA2D1P54289 1103 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 LONRF1Q17RB8 773 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 TRIM68Q6AZZ1 485 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 CTRB2Q6GPI1 263 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 DBX2Q6ZNG2 339 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 SLC51BQ86UW2 128 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 DNAJC9Q8WXX5 260 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 NAPGQ99747 312 aaPredicted RBP9.61□□□□□ -0.87
COMMD3-215ENST00000602574 CYLDQ9NQC7 956 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 ADAM22Q9P0K1 906 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 INTUQ9ULD6 942 aa9.61□□□□□ -0.87
COMMD3-215ENST00000602574 AFF2P51816 1311 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 PLCH2O75038 1416 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 SETD1AO15047 1707 aaKnown RBP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 SMIM31A0A1B0GVY4 71 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 C2orf81A6NN90 581 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 BTBD11A6QL63 1104 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 E9PBE3 544 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 IGF2BP3O00425 579 aaKnown RBP eCLIP9.6□□□□□ -0.87
COMMD3-215ENST00000602574 TJP3O95049 919 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 FKBP9O95302 570 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 ZBED1O96006 694 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 GNAI2P04899 355 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 CHGBP05060 677 aa9.6□□□□□ -0.87
COMMD3-215ENST00000602574 PABPC4LP0CB38 370 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms