RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 MAP6Q96JE9 813 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 CDC6Q99741 560 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 G6PC3Q9BUM1 346 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 ZFP64Q9NPA5 681 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 PRDM7Q9NQW5 492 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 ERVK13-1Q9NX77 482 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 TMEM59LQ9UK28 342 aa6.12□□□□□ -1.43
VRK3-222ENST00000601324 KCPQ6ZWJ8 1503 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 DLX3O60479 287 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 ZGLP1P0C6A0 271 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 KCNA3P22001 575 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 ECI1P42126 302 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 KCNJ6P48051 423 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 SQSTM1Q13501 440 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 SF1Q15637 639 aaKnown RBP6.11□□□□□ -1.43
VRK3-222ENST00000601324 FOXB2Q5VYV0 432 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 CYP2R1Q6VVX0 501 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 SCUBE1Q8IWY4 988 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 TMEM145Q8NBT3 493 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 LINC01599Q8WXQ3 324 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 KCTD13Q8WZ19 329 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 OSBP2Q969R2 916 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 EXOC2Q96KP1 924 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 PTCHD1Q96NR3 888 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 IPO9Q96P70 1041 aaKnown RBP6.11□□□□□ -1.43
VRK3-222ENST00000601324 ADAMTS10Q9H324 1103 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 KANSL2Q9H9L4 492 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 TMEM260Q9NX78 707 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 ADAMTS6Q9UKP5 1117 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 DOT1LQ8TEK3 1739 aa6.11□□□□□ -1.43
VRK3-222ENST00000601324 C5P01031 1676 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 FAM208AQ9UK61 1670 aaKnown RBP6.1□□□□□ -1.43
VRK3-222ENST00000601324 NSD3Q9BZ95 1437 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 TTC21AQ8NDW8 1320 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 TRBV23-1A0A0A0MS06 115 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 FOXN1O15353 648 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 THBDP07204 575 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 GP2P55259 537 aaKnown RBP6.1□□□□□ -1.43
VRK3-222ENST00000601324 FAM209AQ5JX71 171 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 SLC35F1Q5T1Q4 408 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 ACBD5Q5T8D3 534 aaPredicted RBP6.1□□□□□ -1.43
VRK3-222ENST00000601324 NLGN1Q8N2Q7 840 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 NAT16Q8N8M0 369 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 FLAD1Q8NFF5 587 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 NPLOC4Q8TAT6 608 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 FRS2Q8WU20 508 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 C1orf159Q96HA4 380 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 DHRS4Q9BTZ2 278 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 MBNL3Q9NUK0 354 aaKnown RBP6.1□□□□□ -1.43
VRK3-222ENST00000601324 TNFRSF10DQ9UBN6 386 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 BRCA1P38398 1863 aaKnown RBP6.1□□□□□ -1.43
VRK3-222ENST00000601324 UBR3Q6ZT12 1888 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 TAF1LQ8IZX4 1826 aa6.1□□□□□ -1.43
VRK3-222ENST00000601324 KDM6AO15550 1401 aaPredicted RBP6.09□□□□□ -1.43
VRK3-222ENST00000601324 PLEKHG2Q9H7P9 1386 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 TRBV23OR9-2A0A075B6M9 112 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 CCDC163A0A0D9SF12 145 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 ESYT3A0FGR9 886 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 ENPP3O14638 875 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 TBC1D8O95759 1140 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 RNASE1P07998 156 aaKnown RBP6.09□□□□□ -1.43
VRK3-222ENST00000601324 PLS3P13797 630 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 PAMP19021 973 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 L1CAMP32004 1257 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 GDNFP39905 211 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 KIR2DL1P43626 348 aaPredicted RBP6.09□□□□□ -1.43
VRK3-222ENST00000601324 KIR2DL2P43627 348 aaPredicted RBP6.09□□□□□ -1.43
VRK3-222ENST00000601324 TGFB2P61812 414 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 SUMO1P63165 101 aaKnown RBP6.09□□□□□ -1.43
VRK3-222ENST00000601324 PRSS53Q2L4Q9 553 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 ZNF792Q3KQV3 632 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 E4F1Q66K89 784 aaPredicted RBP6.09□□□□□ -1.43
VRK3-222ENST00000601324 SDE2Q6IQ49 451 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 HOMER1Q86YM7 354 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 ABI1Q8IZP0 508 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 ANKS4BQ8N8V4 417 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 KREMEN2Q8NCW0 462 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 SMC1BQ8NDV3 1235 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 TMEM52Q8NDY8 209 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 APPBP2Q92624 585 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 KISS1RQ969F8 398 aaPredicted RBP6.09□□□□□ -1.43
VRK3-222ENST00000601324 HHIPL1Q96JK4 782 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 GPRC5CQ9NQ84 441 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 EBF1Q9UH73 591 aa6.09□□□□□ -1.43
VRK3-222ENST00000601324 MRPS23Q9Y3D9 190 aaKnown RBP6.09□□□□□ -1.43
VRK3-222ENST00000601324 MEGF6O75095 1541 aa6.09□□□□□ -1.44
VRK3-222ENST00000601324 MAP2P11137 1827 aaKnown RBP6.09□□□□□ -1.44
VRK3-222ENST00000601324 C4BP0C0L5 1744 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 PKD1L3Q7Z443 1732 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 NPHP3-ACAD11A0A0J9YXS1 232 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 FADS2P1A8MWK0 482 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 SMARCA5O60264 1052 aaPredicted RBP6.08□□□□□ -1.44
VRK3-222ENST00000601324 HK2P52789 917 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 CHRNEQ04844 493 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 TESK1Q15569 626 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 HLA-DQA1Q5Y7H0 255 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 DENND5AQ6IQ26 1287 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 SLCO6A1Q86UG4 719 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 PPIL6Q8IXY8 311 aa6.08□□□□□ -1.44
VRK3-222ENST00000601324 PDZD8Q8NEN9 1154 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms