RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 DCAF5Q96JK2 942 aa17.58■□□□□ 0.41
SYDE1-204ENST00000600440 UIMC1Q96RL1 719 aa17.58■□□□□ 0.41
SYDE1-204ENST00000600440 TSC22D3Q99576 134 aa17.58■□□□□ 0.41
SYDE1-204ENST00000600440 KBTBD4Q9NVX7 518 aa17.58■□□□□ 0.41
SYDE1-204ENST00000600440 SLC12A4Q9UP95 1085 aa17.58■□□□□ 0.41
SYDE1-204ENST00000600440 TBX22Q9Y458 520 aa17.58■□□□□ 0.41
SYDE1-204ENST00000600440 RGS16O15492 202 aaPredicted RBP17.58■□□□□ 0.4
SYDE1-204ENST00000600440 ABL2P42684 1182 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 BCAMP50895 628 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 PLTPP55058 493 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 LETM2Q2VYF4 491 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 NBPF20Q3BBV1 942 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 ZSCAN29Q8IWY8 852 aaPredicted RBP17.58■□□□□ 0.4
SYDE1-204ENST00000600440 SPDYE3A6NKU9 549 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 PGRMC1O00264 195 aaKnown RBP17.58■□□□□ 0.4
SYDE1-204ENST00000600440 LINGO3P0C6S8 592 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 ATP2A2P16615 1042 aaKnown RBP17.58■□□□□ 0.4
SYDE1-204ENST00000600440 HNRNPH3P31942 346 aaKnown RBP17.58■□□□□ 0.4
SYDE1-204ENST00000600440 CRELD2Q6UXH1 353 aaPredicted RBP17.58■□□□□ 0.4
SYDE1-204ENST00000600440 FMO2Q99518 471 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 FGFR1OP2Q9NVK5 253 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 SLC5A4Q9NY91 659 aa17.58■□□□□ 0.4
SYDE1-204ENST00000600440 G3BP2Q9UN86 482 aaKnown RBP17.58■□□□□ 0.4
SYDE1-204ENST00000600440 UTP11Q9Y3A2 253 aaKnown RBP17.58■□□□□ 0.4
SYDE1-204ENST00000600440 A0A0G2JS52 829 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 H0Y3Z8 333 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 KIF5BP33176 963 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 EPS15P42566 896 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 NCALDP61601 193 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 RNASELQ05823 741 aaKnown RBP17.57■□□□□ 0.4
SYDE1-204ENST00000600440 TROAPQ12815 778 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 MKRN4PQ13434 485 aaPredicted RBP17.57■□□□□ 0.4
SYDE1-204ENST00000600440 HEATR3Q7Z4Q2 680 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 DZIP3Q86Y13 1208 aaKnown RBP17.57■□□□□ 0.4
SYDE1-204ENST00000600440 METTL13Q8N6R0 699 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 ANKRD42Q8N9B4 389 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 ANKS1AQ92625 1134 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 CNTNAP5Q8WYK1 1306 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 ARFGEF2Q9Y6D5 1785 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 UQCRFS1P1P0C7P4 283 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 NEFHP12036 1026 aa17.57■□□□□ 0.4
SYDE1-204ENST00000600440 PECAM1P16284 738 aaPredicted RBP17.57■□□□□ 0.4
SYDE1-204ENST00000600440 LACTBP83111 547 aaPredicted RBP17.57■□□□□ 0.4
SYDE1-204ENST00000600440 UBAP2Q5T6F2 1119 aaKnown RBP17.57■□□□□ 0.4
SYDE1-204ENST00000600440 C1orf131Q8NDD1 294 aaKnown RBP17.57■□□□□ 0.4
SYDE1-204ENST00000600440 TRAF5O00463 557 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 LCA5LO95447 670 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 ATP11AP98196 1134 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 PEX26Q7Z412 305 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 CCHCR1Q8TD31 782 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 ZNF317Q96PQ6 595 aaPredicted RBP17.56■□□□□ 0.4
SYDE1-204ENST00000600440 CNOT10Q9H9A5 744 aaKnown RBP17.56■□□□□ 0.4
SYDE1-204ENST00000600440 PIDD1Q9HB75 910 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 ZFATQ9P243 1243 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 DBR1Q9UK59 544 aaKnown RBP17.56■□□□□ 0.4
SYDE1-204ENST00000600440 ASTE1Q2TB18 679 aaPredicted RBP17.56■□□□□ 0.4
SYDE1-204ENST00000600440 ARL6IP4Q66PJ3 421 aaKnown RBP17.56■□□□□ 0.4
SYDE1-204ENST00000600440 CCDC25Q86WR0 208 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 NELFCDQ8IXH7 590 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 C4orf32Q8N8J7 132 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 DPPA5A6NC42 116 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 CFAP73A6NFT4 308 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 PAEPP09466 180 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 ATP4AP20648 1035 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.4
SYDE1-204ENST00000600440 CNNM4Q6P4Q7 775 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 MARCH10Q8NA82 808 aaPredicted RBP17.56■□□□□ 0.4
SYDE1-204ENST00000600440 GDAP1Q8TB36 358 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 CABLES1Q8TDN4 633 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 SNX24Q9Y343 169 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 RIC1Q4ADV7 1423 aa17.56■□□□□ 0.4
SYDE1-204ENST00000600440 SERPING1P05155 500 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 RARAP10276 462 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
SYDE1-204ENST00000600440 DENND2CQ68D51 928 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 HOOK3Q86VS8 718 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 GLG1Q92896 1179 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 PAPOLBQ9NRJ5 636 aaKnown RBP17.55■□□□□ 0.4
SYDE1-204ENST00000600440 CORO1CQ9ULV4 474 aaPredicted RBP17.55■□□□□ 0.4
SYDE1-204ENST00000600440 SPEF2Q9C093 1822 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 MARF1Q9Y4F3 1742 aaKnown RBP17.55■□□□□ 0.4
SYDE1-204ENST00000600440 SPDYE5A6NIY4 337 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 FOXO6A8MYZ6 492 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 TRAPPC10P48553 1259 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 ICA1Q05084 483 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 KCNMA1Q12791 1236 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 NUGGCQ68CJ6 796 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 EPS8L3Q8TE67 593 aaKnown RBP17.55■□□□□ 0.4
SYDE1-204ENST00000600440 NR2E1Q9Y466 385 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 MYH7P12883 1935 aa17.55■□□□□ 0.4
SYDE1-204ENST00000600440 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
SYDE1-204ENST00000600440 MYH1P12882 1939 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 TULP1O00294 542 aaPredicted RBP17.54■□□□□ 0.4
SYDE1-204ENST00000600440 MAP3K13O43283 966 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 CCNT1O60563 726 aaKnown RBP17.54■□□□□ 0.4
SYDE1-204ENST00000600440 CCND1P24385 295 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 MSH2P43246 934 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 RAB27AP51159 221 aa17.54■□□□□ 0.4
SYDE1-204ENST00000600440 NSRP1Q9H0G5 558 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms