RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 RANBP6O60518 1105 aaKnown RBP20.63■□□□□ 0.89
SSBP4-207ENST00000600244 CHRNA1P02708 482 aa20.63■□□□□ 0.89
SSBP4-207ENST00000600244 NR3C2P08235 984 aa20.63■□□□□ 0.89
SSBP4-207ENST00000600244 ADAM17P78536 824 aa20.63■□□□□ 0.89
SSBP4-207ENST00000600244 CMTR2Q8IYT2 770 aaKnown RBP20.63■□□□□ 0.89
SSBP4-207ENST00000600244 SEC62Q99442 399 aaKnown RBP20.63■□□□□ 0.89
SSBP4-207ENST00000600244 HMMRO75330 724 aa20.62■□□□□ 0.89
SSBP4-207ENST00000600244 SNHG28P0DPA3 235 aa20.62■□□□□ 0.89
SSBP4-207ENST00000600244 EIF2AK2P19525 551 aaKnown RBP20.62■□□□□ 0.89
SSBP4-207ENST00000600244 MTMR3Q13615 1198 aa20.62■□□□□ 0.89
SSBP4-207ENST00000600244 KCNC3Q14003 757 aa20.62■□□□□ 0.89
SSBP4-207ENST00000600244 PUM1Q14671 1186 aaKnown RBP eCLIP20.62■□□□□ 0.89
SSBP4-207ENST00000600244 TMEM184AQ6ZMB5 413 aa20.62■□□□□ 0.89
SSBP4-207ENST00000600244 NEK1Q96PY6 1258 aa20.62■□□□□ 0.89
SSBP4-207ENST00000600244 ECHDC1Q9NTX5 307 aa20.62■□□□□ 0.89
SSBP4-207ENST00000600244 CEP250Q9BV73 2442 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 FOXP2O15409 715 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 ORC4O43929 436 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 SORBS3O60504 671 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 GGPS1O95749 300 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 FGRP09769 529 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 SP2Q02086 613 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 DUSP6Q16828 381 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 ARHGEF16Q5VV41 709 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 PXMP2Q9NR77 195 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 SETD4Q9NVD3 440 aa20.61■□□□□ 0.89
SSBP4-207ENST00000600244 GHRP10912 638 aa20.6■□□□□ 0.89
SSBP4-207ENST00000600244 LPIN1Q14693 890 aa20.6■□□□□ 0.89
SSBP4-207ENST00000600244 SYCE2Q6PIF2 218 aa20.6■□□□□ 0.89
SSBP4-207ENST00000600244 KCNV1Q6PIU1 500 aa20.6■□□□□ 0.89
SSBP4-207ENST00000600244 CDCA3Q99618 268 aaPredicted RBP20.6■□□□□ 0.89
SSBP4-207ENST00000600244 SMOC2Q9H3U7 446 aa20.6■□□□□ 0.89
SSBP4-207ENST00000600244 TCP11L1Q9NUJ3 509 aa20.6■□□□□ 0.89
SSBP4-207ENST00000600244 ANAPC4Q9UJX5 808 aa20.6■□□□□ 0.89
SSBP4-207ENST00000600244 KIAA1671Q9BY89 1806 aa20.6■□□□□ 0.89
SSBP4-207ENST00000600244 ABCB11O95342 1321 aa20.59■□□□□ 0.89
SSBP4-207ENST00000600244 FSD2A1L4K1 749 aa20.59■□□□□ 0.89
SSBP4-207ENST00000600244 LGALS2P05162 132 aa20.59■□□□□ 0.89
SSBP4-207ENST00000600244 GNAT1P11488 350 aa20.59■□□□□ 0.89
SSBP4-207ENST00000600244 MS4A1P11836 297 aa20.59■□□□□ 0.89
SSBP4-207ENST00000600244 ANKRD54Q6NXT1 300 aa20.59■□□□□ 0.89
SSBP4-207ENST00000600244 MCF2L2Q86YR7 1114 aa20.59■□□□□ 0.89
SSBP4-207ENST00000600244 DLL3Q9NYJ7 618 aa20.59■□□□□ 0.89
SSBP4-207ENST00000600244 TGFB3P10600 412 aa20.58■□□□□ 0.89
SSBP4-207ENST00000600244 SP100P23497 879 aaPredicted RBP20.58■□□□□ 0.89
SSBP4-207ENST00000600244 MGAT3Q09327 533 aa20.58■□□□□ 0.89
SSBP4-207ENST00000600244 RTN4RL1Q86UN2 441 aaPredicted RBP20.58■□□□□ 0.89
SSBP4-207ENST00000600244 PANK1Q8TE04 598 aa20.58■□□□□ 0.89
SSBP4-207ENST00000600244 LINC01599Q8WXQ3 324 aa20.58■□□□□ 0.89
SSBP4-207ENST00000600244 ZFHX4Q86UP3 3567 aa20.58■□□□□ 0.88
SSBP4-207ENST00000600244 HSPD1P10809 573 aaKnown RBP20.57■□□□□ 0.88
SSBP4-207ENST00000600244 UBA1P22314 1058 aaKnown RBP20.57■□□□□ 0.88
SSBP4-207ENST00000600244 UBE3AQ05086 875 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 KIAA2013Q8IYS2 634 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 MICAL1Q8TDZ2 1067 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 CPVLQ9H3G5 476 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 SEMA4AQ9H3S1 761 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 BCAS3Q9H6U6 928 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 PLXNA4Q9HCM2 1894 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 NR2E1Q9Y466 385 aa20.57■□□□□ 0.88
SSBP4-207ENST00000600244 SUPT16HQ9Y5B9 1047 aaKnown RBP20.57■□□□□ 0.88
SSBP4-207ENST00000600244 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
SSBP4-207ENST00000600244 ARP10275 920 aa20.56■□□□□ 0.88
SSBP4-207ENST00000600244 CWF19L1Q69YN2 538 aaKnown RBP20.56■□□□□ 0.88
SSBP4-207ENST00000600244 VSIG10LQ86VR7 867 aa20.56■□□□□ 0.88
SSBP4-207ENST00000600244 RASGRP4Q8TDF6 673 aa20.56■□□□□ 0.88
SSBP4-207ENST00000600244 PDCD2LQ9BRP1 358 aa20.56■□□□□ 0.88
SSBP4-207ENST00000600244 LRRCC1Q9C099 1032 aa20.56■□□□□ 0.88
SSBP4-207ENST00000600244 UBA5Q9GZZ9 404 aa20.56■□□□□ 0.88
SSBP4-207ENST00000600244 C2CD4DB7Z1M9 353 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 PI15O43692 258 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 PPFIA3O75145 1194 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 LMNAP02545 664 aaKnown RBP20.55■□□□□ 0.88
SSBP4-207ENST00000600244 TECP42680 631 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 ERVFC1P60507 584 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 ANGPT1Q15389 498 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 CDC37Q16543 378 aaPredicted RBP20.55■□□□□ 0.88
SSBP4-207ENST00000600244 PAN2Q504Q3 1202 aaKnown RBP20.55■□□□□ 0.88
SSBP4-207ENST00000600244 FBXO47Q5MNV8 452 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 NPAS4Q8IUM7 802 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 CCDC105Q8IYK2 499 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 LMBR1Q8WVP7 490 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 USP26Q9BXU7 913 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 MFSD1Q9H3U5 465 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 MLXIPQ9HAP2 919 aa20.55■□□□□ 0.88
SSBP4-207ENST00000600244 FSCN2O14926 492 aa20.54■□□□□ 0.88
SSBP4-207ENST00000600244 HOXB8P17481 243 aaPredicted RBP20.54■□□□□ 0.88
SSBP4-207ENST00000600244 ARHGAP4P98171 946 aa20.54■□□□□ 0.88
SSBP4-207ENST00000600244 GHRHRQ02643 423 aa20.54■□□□□ 0.88
SSBP4-207ENST00000600244 ZMYM1Q5SVZ6 1142 aa20.54■□□□□ 0.88
SSBP4-207ENST00000600244 GPATCH4Q5T3I0 446 aaKnown RBP20.54■□□□□ 0.88
SSBP4-207ENST00000600244 PDE12Q6L8Q7 609 aaKnown RBP20.54■□□□□ 0.88
SSBP4-207ENST00000600244 GPKOWQ92917 476 aaPredicted RBP eCLIP20.54■□□□□ 0.88
SSBP4-207ENST00000600244 TTC14Q96N46 770 aa20.54■□□□□ 0.88
SSBP4-207ENST00000600244 APOL5Q9BWW9 433 aa20.54■□□□□ 0.88
SSBP4-207ENST00000600244 AGO3Q9H9G7 860 aaKnown RBP20.54■□□□□ 0.88
SSBP4-207ENST00000600244 MRPL11Q9Y3B7 192 aaKnown RBP20.54■□□□□ 0.88
SSBP4-207ENST00000600244 OTOGLQ3ZCN5 2332 aa20.54■□□□□ 0.88
SSBP4-207ENST00000600244 GOLGA8HP0CJ92 632 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms