RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PCDHGC5Q9Y5F6 944 aa16.13■□□□□ 0.17
SHKBP1-218ENST00000598907 KIAA1671Q9BY89 1806 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 NCOR2Q9Y618 2525 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 KIAA1217Q5T5P2 1943 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 TSPY2A6NKD2 308 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 TSGA10IPQ3SY00 556 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 USH1GQ495M9 461 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 MCTP2Q6DN12 878 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 DCAF4Q8WV16 495 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 ATP6V0A1Q93050 837 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 NAPBQ9H115 298 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 ANAPC4Q9UJX5 808 aa16.12■□□□□ 0.17
SHKBP1-218ENST00000598907 SLC27A2O14975 620 aa16.11■□□□□ 0.17
SHKBP1-218ENST00000598907 SLC3A2P08195 630 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-218ENST00000598907 CYP21A2P08686 494 aa16.11■□□□□ 0.17
SHKBP1-218ENST00000598907 CREB3L3Q68CJ9 461 aa16.11■□□□□ 0.17
SHKBP1-218ENST00000598907 IL17RBQ9NRM6 502 aa16.11■□□□□ 0.17
SHKBP1-218ENST00000598907 PLAGL2Q9UPG8 496 aa16.11■□□□□ 0.17
SHKBP1-218ENST00000598907 MRVI1Q9Y6F6 885 aa16.11■□□□□ 0.17
SHKBP1-218ENST00000598907 KMT2BQ9UMN6 2715 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-218ENST00000598907 C17orf102A2RUQ5 167 aa16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 PPARAQ07869 468 aa16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 KREMEN2Q8NCW0 462 aa16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 PPTC7Q8NI37 304 aa16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 CLP1Q92989 425 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 TBC1D32Q96NH3 1257 aa16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 SMOC2Q9H3U7 446 aa16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 UPF2Q9HAU5 1272 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-218ENST00000598907 ZNF213O14771 459 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 TREHO43280 583 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 ITGB1P05556 798 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 LAMC2Q13753 1193 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 IMMTQ16891 758 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 BTNL9Q6UXG8 535 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 APBB2Q92870 758 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 TAAR1Q96RJ0 339 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 APOL5Q9BWW9 433 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 RC3H2Q9HBD1 1191 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 MRPL42Q9Y6G3 142 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-218ENST00000598907 DMXL1Q9Y485 3027 aa16.08■□□□□ 0.17
SHKBP1-218ENST00000598907 MYH7BA7E2Y1 1941 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 PER2O15055 1255 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 FGRP09769 529 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 ANAPC15P60006 121 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 STXBP2Q15833 593 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 RNF20Q5VTR2 975 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 KIAA2013Q8IYS2 634 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 KCNG4Q8TDN1 519 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 POF1BQ8WVV4 589 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 PLVAPQ9BX97 442 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 MFSD1Q9H3U5 465 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 TLE6Q9H808 572 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 COL20A1Q9P218 1284 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 SNX14Q9Y5W7 946 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 TAF6LQ9Y6J9 622 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 CACNA1GO43497 2377 aa16.08■□□□□ 0.16
SHKBP1-218ENST00000598907 DNAH14Q0VDD8 3507 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 RANBP6O60518 1105 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 SMIM10L2AP0DMW4 78 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 SMIM10L2BP0DMW5 78 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 ATF7P17544 494 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 CTDSPL2Q05D32 466 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 MTMR3Q13615 1198 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 PAN2Q504Q3 1202 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 KLHL23Q8NBE8 558 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 VN1R2Q8NFZ6 395 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 SPPL3Q8TCT6 385 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 TBC1D5Q92609 795 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 SPATA33Q96N06 139 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 KIF2CQ99661 725 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 ZNF292O60281 2723 aa16.07■□□□□ 0.16
SHKBP1-218ENST00000598907 PLXNA4Q9HCM2 1894 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 BRD1O95696 1058 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 GHRP10912 638 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 HAND2P61296 217 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 HSDL1Q3SXM5 330 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 ASTLQ6HA08 431 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 STOX1Q6ZVD7 989 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 TBC1D10CQ8IV04 446 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 NSUN6Q8TEA1 469 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 SUSD6Q92537 303 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 P2RX5Q93086 422 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 RMDN3Q96TC7 470 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 WDR87Q6ZQQ6 2873 aa16.06■□□□□ 0.16
SHKBP1-218ENST00000598907 ZFHX4Q86UP3 3567 aa16.05■□□□□ 0.16
SHKBP1-218ENST00000598907 E7EWF7 191 aa16.05■□□□□ 0.16
SHKBP1-218ENST00000598907 ARHGEF16Q5VV41 709 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms