RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 WASF1Q92558 559 aa13.71□□□□□ -0.21
ZNF548-209ENST00000598895 SDF4Q9BRK5 362 aa13.71□□□□□ -0.21
ZNF548-209ENST00000598895 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.21
ZNF548-209ENST00000598895 HIPK3Q9H422 1215 aa13.71□□□□□ -0.21
ZNF548-209ENST00000598895 JPH1Q9HDC5 661 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-209ENST00000598895 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 H3BRB1 525 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 HAS3O00219 553 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 MAFGO15525 162 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 EDIL3O43854 480 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 CD2BP2O95400 341 aaKnown RBP13.7□□□□□ -0.22
ZNF548-209ENST00000598895 CYP3A4P08684 503 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 HOXD8P13378 290 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-209ENST00000598895 CSF2RAP15509 400 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 MARK3P27448 753 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 BMP8BP34820 402 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 ZNF200P98182 395 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-209ENST00000598895 GUCY1B3Q02153 619 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 HIC1Q14526 733 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 INF2Q27J81 1249 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 C9orf50Q5SZB4 431 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 DAGLBQ8NCG7 672 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 ANP32BQ92688 251 aaKnown RBP13.7□□□□□ -0.22
ZNF548-209ENST00000598895 SCLYQ96I15 445 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 ZSCAN31Q96LW9 406 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-209ENST00000598895 ZNF577Q9BSK1 485 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 NOC4LQ9BVI4 516 aaKnown RBP13.7□□□□□ -0.22
ZNF548-209ENST00000598895 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 TUT1Q9H6E5 874 aaKnown RBP13.7□□□□□ -0.22
ZNF548-209ENST00000598895 SLC9A2Q9UBY0 812 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 GTF2IRD1Q9UHL9 959 aa13.7□□□□□ -0.22
ZNF548-209ENST00000598895 CEP290O15078 2479 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 FAM205CA6NFA0 338 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 M0R2N6 131 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 TDP2O95551 362 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 SUPT20HL2P0C7V6 817 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 ACRP10323 421 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 PTPN11Q06124 597 aaPredicted RBP13.69□□□□□ -0.22
ZNF548-209ENST00000598895 NONOQ15233 471 aaKnown RBP eCLIP13.69□□□□□ -0.22
ZNF548-209ENST00000598895 SHHQ15465 462 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 MFSD5Q6N075 450 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 TDHQ8IZJ6 230 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 GJA10Q969M2 543 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 TRIM44Q96DX7 344 aaPredicted RBP13.69□□□□□ -0.22
ZNF548-209ENST00000598895 WNT8AQ9H1J5 351 aa13.69□□□□□ -0.22
ZNF548-209ENST00000598895 NFASCO94856 1347 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 CCDC194A0A1B0GVG4 234 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 IPO5O00410 1097 aaKnown RBP13.68□□□□□ -0.22
ZNF548-209ENST00000598895 SMIM10L2AP0DMW4 78 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 SMIM10L2BP0DMW5 78 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 KRT2P35908 639 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 MCM2P49736 904 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 ACTR2P61160 394 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 NR5A1Q13285 461 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 TRIM29Q14134 588 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
ZNF548-209ENST00000598895 GALNT17Q6IS24 598 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 PIK3AP1Q6ZUJ8 805 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 NIPA1Q7RTP0 329 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 KRT25Q7Z3Z0 450 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 TMEM199Q8N511 208 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 GLG1Q92896 1179 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 RRAGDQ9NQL2 400 aaPredicted RBP13.68□□□□□ -0.22
ZNF548-209ENST00000598895 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
ZNF548-209ENST00000598895 ZNF215Q9UL58 517 aaPredicted RBP13.68□□□□□ -0.22
ZNF548-209ENST00000598895 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
ZNF548-209ENST00000598895 TANC1Q9C0D5 1861 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 TRIP12Q14669 1992 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-209ENST00000598895 C17orf102A2RUQ5 167 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 SOX1O00570 391 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-209ENST00000598895 DHX15O43143 795 aaKnown RBP13.67□□□□□ -0.22
ZNF548-209ENST00000598895 CCNE2O96020 404 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 CIITAP33076 1130 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 SETQ01105 290 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-209ENST00000598895 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 LETM2Q2VYF4 491 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 KRT40Q6A162 431 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 SESTD1Q86VW0 696 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 DHX38Q92620 1227 aaKnown RBP13.67□□□□□ -0.22
ZNF548-209ENST00000598895 WNT8BQ93098 351 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 LENG9Q96B70 501 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 CTAGE1Q96RT6 745 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 PCYT2Q99447 389 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 SETD4Q9NVD3 440 aa13.67□□□□□ -0.22
ZNF548-209ENST00000598895 BTBD18B2RXH4 712 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 MSH4O15457 936 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 CHMP2AO43633 222 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
ZNF548-209ENST00000598895 MMP1P03956 469 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 FXR1P51114 621 aaKnown RBP eCLIP13.66□□□□□ -0.22
ZNF548-209ENST00000598895 USP11P51784 963 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 IGBP1P78318 339 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 C16orf59Q7L2K0 433 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
ZNF548-209ENST00000598895 DEFB128Q7Z7B8 93 aa13.66□□□□□ -0.22
ZNF548-209ENST00000598895 DIS3L2Q8IYB7 885 aaKnown RBP13.66□□□□□ -0.22
ZNF548-209ENST00000598895 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms