RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 ITIH3Q06033 890 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 IKQ13123 557 aaPredicted RBP5.3□□□□□ -1.56
HERC3-213ENST00000598772 SF3A2Q15428 464 aaKnown RBP5.3□□□□□ -1.56
HERC3-213ENST00000598772 CSRP2Q16527 193 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 ZNF528Q3MIS6 628 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 RABL6Q3YEC7 729 aaPredicted RBP5.3□□□□□ -1.56
HERC3-213ENST00000598772 NAALADL2Q58DX5 795 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 STPG1Q5TH74 334 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 LAIR1Q6GTX8 287 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 DCLRE1AQ6PJP8 1040 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 TRAF7Q6Q0C0 670 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 OTOP3Q7RTS5 596 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.3□□□□□ -1.56
HERC3-213ENST00000598772 THNSL1Q8IYQ7 743 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 PRPF38AQ8NAV1 312 aaKnown RBP5.3□□□□□ -1.56
HERC3-213ENST00000598772 AFG1LQ8WV93 481 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 CASP10Q92851 521 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 GATA6Q92908 595 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 DYNLL2Q96FJ2 89 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 BORCS6Q96GS4 357 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 TRERF1Q96PN7 1200 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 EHD4Q9H223 541 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 ACAD9Q9H845 621 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 A1CFQ9NQ94 594 aaKnown RBP5.3□□□□□ -1.56
HERC3-213ENST00000598772 RNF146Q9NTX7 359 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 FBXO4Q9UKT5 387 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 PA2G4Q9UQ80 394 aaKnown RBP5.3□□□□□ -1.56
HERC3-213ENST00000598772 GPSM3Q9Y4H4 160 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 PCDHB12Q9Y5F1 795 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 RAI2Q9Y5P3 530 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 COL4A3Q01955 1670 aa5.3□□□□□ -1.56
HERC3-213ENST00000598772 FSD2A1L4K1 749 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 A6NJR5 290 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 FAM170BA6NMN3 283 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 HIDE1A8MVS5 230 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 J3QKU1 62 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 APAF1O14727 1248 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 AXIN1O15169 862 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 LINC00271P0C7V0 271 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 CYP2D6P10635 497 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 CASTP20810 708 aaKnown RBP5.29□□□□□ -1.56
HERC3-213ENST00000598772 GBP2P32456 591 aaPredicted RBP5.29□□□□□ -1.56
HERC3-213ENST00000598772 SNAP25P60880 206 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 PDE4DQ08499 809 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 SIM2Q14190 667 aaPredicted RBP5.29□□□□□ -1.56
HERC3-213ENST00000598772 NONOQ15233 471 aaKnown RBP eCLIP5.29□□□□□ -1.56
HERC3-213ENST00000598772 PTPN14Q15678 1187 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 KIAA0753Q2KHM9 967 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 TRIM71Q2Q1W2 868 aaKnown RBP5.29□□□□□ -1.56
HERC3-213ENST00000598772 TMC5Q6UXY8 1006 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 LRRC47Q8N1G4 583 aaKnown RBP5.29□□□□□ -1.56
HERC3-213ENST00000598772 PJA1Q8NG27 643 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 GPR152Q8TDT2 470 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 MAP4K1Q92918 833 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 ARHGEF3Q9NR81 526 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 AAASQ9NRG9 546 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 MCM9Q9NXL9 1143 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 DLGAP2Q9P1A6 1054 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 GTF2IRD1Q9UHL9 959 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 ANKRD17O75179 2603 aaKnown RBP5.29□□□□□ -1.56
HERC3-213ENST00000598772 FANCMQ8IYD8 2048 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 MYO9AB2RTY4 2548 aa5.29□□□□□ -1.56
HERC3-213ENST00000598772 PDS5AQ29RF7 1337 aaKnown RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 SPTAN1Q13813 2472 aaKnown RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 ENPP3O14638 875 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 KALRNO60229 2985 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 SORBS3O60504 671 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 FGF18O76093 207 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 ZNF286BP0CG31 522 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 HOXD8P13378 290 aaPredicted RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 CD72P21854 359 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 IL15P40933 162 aaPredicted RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 RFX5P48382 616 aaPredicted RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 GATMP50440 423 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 RBL2Q08999 1139 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 TFCP2Q12800 502 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 SNW1Q13573 536 aaKnown RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 MFSD10Q14728 455 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 PHLDB3Q6NSJ2 640 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 TMEM184AQ6ZMB5 413 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 TMC7Q7Z402 723 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 SLC44A3Q8N4M1 653 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 CELF5Q8N6W0 485 aaKnown RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 ZBTB44Q8NCP5 570 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 KAT2BQ92831 832 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 ATP6V0A1Q93050 837 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 FAM212AQ96EL1 285 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 TCF25Q9BQ70 676 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 CLMPQ9H6B4 373 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 RXFP3Q9NSD7 469 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 PUF60Q9UHX1 559 aaKnown RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 LRFN2Q9ULH4 789 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 USTQ9Y2C2 406 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 AKAP2Q9Y2D5 859 aa5.28□□□□□ -1.56
HERC3-213ENST00000598772 MTF2Q9Y483 593 aaPredicted RBP5.28□□□□□ -1.56
HERC3-213ENST00000598772 SCN10AQ9Y5Y9 1956 aa5.27□□□□□ -1.57
HERC3-213ENST00000598772 MYH1P12882 1939 aa5.27□□□□□ -1.57
HERC3-213ENST00000598772 PTPDC1A2A3K4 754 aa5.27□□□□□ -1.57
HERC3-213ENST00000598772 TM4SF5O14894 197 aa5.27□□□□□ -1.57
HERC3-213ENST00000598772 NKRFO15226 690 aaKnown RBP eCLIP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms