RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 EPHX3Q9H6B9 360 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 MAFGO15525 162 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 SGSM2O43147 1006 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 UPP2O95045 317 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 UTP14CQ5TAP6 766 aaKnown RBP19.56■□□□□ 0.72
PNKP-210ENST00000597965 ZNF654Q8IZM8 581 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 BANK1Q8NDB2 785 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 LMBR1Q8WVP7 490 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 PIBF1Q8WXW3 757 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 MAP4K1Q92918 833 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 ERAP1Q9NZ08 941 aa19.56■□□□□ 0.72
PNKP-210ENST00000597965 CCDC69A6NI79 296 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 PI4K2BG5E9Z4 385 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 MCM5P33992 734 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 ADAM17P78536 824 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 SEMA3FQ13275 785 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 GPM6BQ13491 265 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 USP17L6PQ6QN14 398 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 NFXL1Q6ZNB6 911 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 TMEM192Q8IY95 271 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 MB21D2Q8IYB1 491 aaPredicted RBP19.55■□□□□ 0.72
PNKP-210ENST00000597965 IL17RAQ96F46 866 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 TMEM87BQ96K49 555 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 PSTPIP2Q9H939 334 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 EHMT1Q9H9B1 1298 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 SENP2Q9HC62 589 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 RAPGEFL1Q9UHV5 662 aa19.55■□□□□ 0.72
PNKP-210ENST00000597965 RALGAPA2Q2PPJ7 1873 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 SPDYE3A6NKU9 549 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 MEIS2O14770 477 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 RB1P06400 928 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 PDE4AP27815 886 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 TCF7P36402 384 aaPredicted RBP19.54■□□□□ 0.72
PNKP-210ENST00000597965 SP4Q02446 784 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 PTCRAQ6ISU1 281 aaPredicted RBP19.54■□□□□ 0.72
PNKP-210ENST00000597965 TRIM50Q86XT4 487 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 TEX2Q8IWB9 1127 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 FAM178BQ8IXR5 827 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 GJD3Q8N144 294 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 FIBCD1Q8N539 461 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 SEPT1Q8WYJ6 367 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 NSUN3Q9H649 340 aaKnown RBP19.54■□□□□ 0.72
PNKP-210ENST00000597965 BCAS3Q9H6U6 928 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 LY9Q9HBG7 655 aa19.54■□□□□ 0.72
PNKP-210ENST00000597965 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.53■□□□□ 0.72
PNKP-210ENST00000597965 ALADP13716 330 aa19.53■□□□□ 0.72
PNKP-210ENST00000597965 ANTXR2P58335 489 aa19.53■□□□□ 0.72
PNKP-210ENST00000597965 PPFIA1Q13136 1202 aa19.53■□□□□ 0.72
PNKP-210ENST00000597965 MTMR1Q13613 665 aa19.53■□□□□ 0.72
PNKP-210ENST00000597965 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.53■□□□□ 0.72
PNKP-210ENST00000597965 NEK9Q8TD19 979 aa19.53■□□□□ 0.72
PNKP-210ENST00000597965 GLG1Q92896 1179 aa19.53■□□□□ 0.72
PNKP-210ENST00000597965 PABPC5Q96DU9 382 aaKnown RBP19.53■□□□□ 0.72
PNKP-210ENST00000597965 C11orf84Q9BUA3 381 aaPredicted RBP19.53■□□□□ 0.72
PNKP-210ENST00000597965 LMAN2LQ9H0V9 348 aa19.53■□□□□ 0.72
PNKP-210ENST00000597965 SMARCAD1Q9H4L7 1026 aa19.53■□□□□ 0.72
PNKP-210ENST00000597965 DOCK5Q9H7D0 1870 aa19.52■□□□□ 0.72
PNKP-210ENST00000597965 GRXCR2A6NFK2 248 aa19.52■□□□□ 0.72
PNKP-210ENST00000597965 SSTR3P32745 418 aaPredicted RBP19.52■□□□□ 0.72
PNKP-210ENST00000597965 FAM43BQ6ZT52 329 aaPredicted RBP19.52■□□□□ 0.72
PNKP-210ENST00000597965 TUBE1Q9UJT0 475 aa19.52■□□□□ 0.72
PNKP-210ENST00000597965 RBM8AQ9Y5S9 174 aaKnown RBP19.52■□□□□ 0.72
PNKP-210ENST00000597965 NLRC5Q86WI3 1866 aa19.52■□□□□ 0.71
PNKP-210ENST00000597965 RRN3P2A6NIE6 340 aa19.51■□□□□ 0.71
PNKP-210ENST00000597965 C5orf67F2Z3F1 127 aa19.51■□□□□ 0.71
PNKP-210ENST00000597965 PRC1O43663 620 aa19.51■□□□□ 0.71
PNKP-210ENST00000597965 LIFRP42702 1097 aa19.51■□□□□ 0.71
PNKP-210ENST00000597965 IER5Q5VY09 327 aa19.51■□□□□ 0.71
PNKP-210ENST00000597965 PRKAG3Q9UGI9 489 aa19.51■□□□□ 0.71
PNKP-210ENST00000597965 M0QZ92 97 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 CHRNA1P02708 482 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 KCNA2P16389 499 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 CTNNB1P35222 781 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 GRIK4Q16099 956 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 MYL10Q9BUA6 226 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 PLVAPQ9BX97 442 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 FTHL17Q9BXU8 183 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 AZI2Q9H6S1 392 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 GTF3C3Q9Y5Q9 886 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 SLC12A7Q9Y666 1083 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 TAF6LQ9Y6J9 622 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 SQORQ9Y6N5 450 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 ADGRA3Q8IWK6 1321 aa19.5■□□□□ 0.71
PNKP-210ENST00000597965 MBLAC1A4D2B0 266 aaPredicted RBP19.49■□□□□ 0.71
PNKP-210ENST00000597965 PRR33A8MZF0 331 aa19.49■□□□□ 0.71
PNKP-210ENST00000597965 GHRP10912 638 aa19.49■□□□□ 0.71
PNKP-210ENST00000597965 TCEAL5Q5H9L2 206 aa19.49■□□□□ 0.71
PNKP-210ENST00000597965 SYNE3Q6ZMZ3 975 aa19.49■□□□□ 0.71
PNKP-210ENST00000597965 TSHZ1Q6ZSZ6 1077 aa19.49■□□□□ 0.71
PNKP-210ENST00000597965 EP400NLQ6ZTU2 488 aa19.49■□□□□ 0.71
PNKP-210ENST00000597965 PPP2R3CQ969Q6 453 aa19.49■□□□□ 0.71
PNKP-210ENST00000597965 JADE2Q9NQC1 790 aa19.49■□□□□ 0.71
PNKP-210ENST00000597965 SH2B2O14492 632 aaPredicted RBP19.48■□□□□ 0.71
PNKP-210ENST00000597965 IL9P15248 144 aa19.48■□□□□ 0.71
PNKP-210ENST00000597965 ITGB5P18084 799 aa19.48■□□□□ 0.71
PNKP-210ENST00000597965 BMPR1AP36894 532 aa19.48■□□□□ 0.71
PNKP-210ENST00000597965 LPIN1Q14693 890 aa19.48■□□□□ 0.71
PNKP-210ENST00000597965 COL19A1Q14993 1142 aa19.48■□□□□ 0.71
PNKP-210ENST00000597965 CSPP1Q1MSJ5 1256 aa19.48■□□□□ 0.71
PNKP-210ENST00000597965 SRBD1Q8N5C6 995 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms