RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ZNF746Q6NUN9 644 aaPredicted RBP24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 C4orf32Q8N8J7 132 aa24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 FERMT2Q96AC1 680 aa24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 UNC45AQ9H3U1 944 aa24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 TTC12Q9H892 705 aaPredicted RBP24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 CLIC4Q9Y696 253 aa24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 KIAA0100Q14667 2235 aaKnown RBP24.95■■□□□ 1.58
CHMP2A-204ENST00000597848 MOXD2PA6NHM9 499 aa24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 BMP15O95972 392 aa24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 TCF7P36402 384 aaPredicted RBP24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 MIS18BP1Q6P0N0 1132 aa24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 CXCL17Q6UXB2 119 aa24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 MIER3Q7Z3K6 550 aa24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 FTOQ9C0B1 505 aaKnown RBP eCLIP24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 TFIP11Q9UBB9 837 aaKnown RBP24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 PHF24Q9UPV7 400 aa24.94■■□□□ 1.58
CHMP2A-204ENST00000597848 LAD1O00515 517 aa24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 CHMP4BP1P59074 171 aa24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 SMAP1Q8IYB5 467 aaPredicted RBP24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 DIS3LQ8TF46 1054 aaKnown RBP24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 USP28Q96RU2 1077 aa24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 MTG1Q9BT17 334 aaPredicted RBP24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 DISC1Q9NRI5 854 aa24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 VAV3Q9UKW4 847 aa24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 CIZ1Q9ULV3 898 aaPredicted RBP24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 ATP6V1DQ9Y5K8 247 aa24.93■■□□□ 1.58
CHMP2A-204ENST00000597848 WDR64B1ANS9 1081 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 BACH1O14867 736 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 LGALS2P05162 132 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 PSAPP07602 524 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 ZNF286BP0CG31 522 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 SFNP31947 248 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 TECP42680 631 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 MNX1P50219 401 aaPredicted RBP24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 JAK3P52333 1124 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 ATP2C1P98194 919 aaPredicted RBP24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 PURAQ00577 322 aaKnown RBP24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 TMEM266Q2M3C6 531 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 NCAPH2Q6IBW4 605 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 PAWRQ96IZ0 340 aaKnown RBP24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 GLT1D1Q96MS3 346 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 SENP6Q9GZR1 1112 aaPredicted RBP24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 AZI2Q9H6S1 392 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 PCDHA10Q9Y5I2 948 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 DOCK5Q9H7D0 1870 aa24.92■■□□□ 1.58
CHMP2A-204ENST00000597848 A0A1W2PQ45 241 aaPredicted RBP24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 A0A1W2PQY0 241 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 CABYRO75952 493 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 ATG7O95352 703 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 SUPT20HL2P0C7V6 817 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 HOXD8P13378 290 aaPredicted RBP24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 PPP2R5CQ13362 524 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 ABHD15Q6UXT9 468 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 DTHD1Q6ZMT9 781 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 GLG1Q92896 1179 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 C11orf49Q9H6J7 331 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 FRMPD3Q5JV73 1810 aa24.91■■□□□ 1.58
CHMP2A-204ENST00000597848 PRPHP41219 470 aa24.9■■□□□ 1.58
CHMP2A-204ENST00000597848 DNM1Q05193 864 aaKnown RBP24.9■■□□□ 1.58
CHMP2A-204ENST00000597848 SWSAP1Q6NVH7 229 aa24.9■■□□□ 1.58
CHMP2A-204ENST00000597848 NECAB2Q7Z6G3 386 aa24.9■■□□□ 1.58
CHMP2A-204ENST00000597848 CHMP5Q9NZZ3 219 aa24.9■■□□□ 1.58
CHMP2A-204ENST00000597848 EML1O00423 815 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 PSMC6P62333 389 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 STK38Q15208 465 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 FAM160B1Q5W0V3 765 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 B3GNT9Q6UX72 402 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 TRIM50Q86XT4 487 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 RDM1Q8NG50 284 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 C16orf70Q9BSU1 422 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 SMARCAD1Q9H4L7 1026 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 STARD7Q9NQZ5 370 aa24.89■■□□□ 1.58
CHMP2A-204ENST00000597848 H3BRB1 525 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 NCLP19338 710 aaKnown RBP24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 STAT5BP51692 787 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 SPIRE1Q08AE8 756 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 PTPAQ15257 358 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 ARL6IP4Q66PJ3 421 aaKnown RBP24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 ATL3Q6DD88 541 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 KAT2BQ92831 832 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 PCYT2Q99447 389 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 RAB34Q9BZG1 259 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 TUT1Q9H6E5 874 aaKnown RBP24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 ZNF302Q9NR11 478 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 GABBR1Q9UBS5 961 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 CFAP45Q9UL16 551 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 ZNF215Q9UL58 517 aaPredicted RBP24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 CENPFP49454 3210 aa24.88■■□□□ 1.57
CHMP2A-204ENST00000597848 VWA3AA6NCI4 1184 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 POTEMA6NI47 508 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 LGR5O75473 907 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 COL6A1P12109 1028 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 MARCKSP29966 332 aaPredicted RBP24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 NASPP49321 788 aaPredicted RBP24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 PSEN2P49810 448 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 FXR2P51116 673 aaKnown RBP eCLIP24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 MFSD10Q14728 455 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 SLC39A14Q15043 492 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 EPHA7Q15375 998 aa24.87■■□□□ 1.57
CHMP2A-204ENST00000597848 CCDC60Q8IWA6 550 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms