RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 USP4Q13107 963 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 LRRC23Q53EV4 343 aaPredicted RBP16.83■□□□□ 0.28
PDE4C-211ENST00000597360 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 LRIG3Q6UXM1 1119 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 B4GALNT2Q8NHY0 566 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 MAGEC3Q8TD91 643 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 DUSP9Q99956 384 aaKnown RBP16.83■□□□□ 0.28
PDE4C-211ENST00000597360 F8W031 263 aaPredicted RBP16.83■□□□□ 0.28
PDE4C-211ENST00000597360 FGFR1OPO95684 399 aaKnown RBP16.83■□□□□ 0.28
PDE4C-211ENST00000597360 ITGA6P23229 1130 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 SLMAPQ14BN4 828 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 ASIC2Q16515 512 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 CD302Q8IX05 232 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 VAT1LQ9HCJ6 419 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 PNMA3Q9UL41 463 aa16.83■□□□□ 0.28
PDE4C-211ENST00000597360 NOC2LQ9Y3T9 749 aaKnown RBP16.83■□□□□ 0.28
PDE4C-211ENST00000597360 KDM6AO15550 1401 aaPredicted RBP16.83■□□□□ 0.28
PDE4C-211ENST00000597360 TSNAXIP1Q2TAA8 658 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 FAM129AQ9BZQ8 928 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 DNAJC17Q9NVM6 304 aaKnown RBP16.82■□□□□ 0.28
PDE4C-211ENST00000597360 hCG_2014768A0A024R1R8 64 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 DPPA5A6NC42 116 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 SMNDC1O75940 238 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDE4C-211ENST00000597360 ABCB4P21439 1286 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 TECP42680 631 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 MSH2P43246 934 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 RNASELQ05823 741 aaKnown RBP16.82■□□□□ 0.28
PDE4C-211ENST00000597360 CHRNA2Q15822 529 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 PAGR1Q9BTK6 254 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 ZMYND12Q9H0C1 365 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 ARPP21Q9UBL0 812 aaPredicted RBP16.82■□□□□ 0.28
PDE4C-211ENST00000597360 USH1CQ9Y6N9 552 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 AMPD3Q01432 767 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
PDE4C-211ENST00000597360 PURBQ96QR8 312 aaKnown RBP16.82■□□□□ 0.28
PDE4C-211ENST00000597360 MAP3K15Q6ZN16 1313 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 CCDC169A6NNP5 214 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 GHRP10912 638 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 LONP1P36776 959 aaKnown RBP16.81■□□□□ 0.28
PDE4C-211ENST00000597360 UBE3CQ15386 1083 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 RASIP1Q5U651 963 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 A0A087X0T9 212 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 FGGP02679 453 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 KRT18P05783 430 aaKnown RBP16.81■□□□□ 0.28
PDE4C-211ENST00000597360 FAM228BP0C875 321 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 VEGFAP15692 232 aaPredicted RBP16.81■□□□□ 0.28
PDE4C-211ENST00000597360 TXKP42681 527 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 MAN2A1Q16706 1144 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 C11orf91Q3C1V1 193 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 AGBL2Q5U5Z8 902 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 ARHGEF2Q92974 986 aaKnown RBP16.81■□□□□ 0.28
PDE4C-211ENST00000597360 PHF20Q9BVI0 1012 aa16.81■□□□□ 0.28
PDE4C-211ENST00000597360 ZNF211Q13398 564 aaPredicted RBP16.8■□□□□ 0.28
PDE4C-211ENST00000597360 LACTB2Q53H82 288 aaPredicted RBP16.8■□□□□ 0.28
PDE4C-211ENST00000597360 CNNM4Q6P4Q7 775 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 NEK9Q8TD19 979 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 EBF2Q9HAK2 575 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 LRRC4CQ9HCJ2 640 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 KLHL14Q9P2G3 628 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 TBK1Q9UHD2 729 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 CORO1CQ9ULV4 474 aaPredicted RBP16.8■□□□□ 0.28
PDE4C-211ENST00000597360 RTL9Q8NET4 1388 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 BYSLQ13895 437 aaKnown RBP16.8■□□□□ 0.28
PDE4C-211ENST00000597360 IL17AQ16552 155 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 IFI16Q16666 785 aaKnown RBP16.8■□□□□ 0.28
PDE4C-211ENST00000597360 UBA5Q9GZZ9 404 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 PIDD1Q9HB75 910 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 HOMER3Q9NSC5 361 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDE4C-211ENST00000597360 SH3BP1Q9Y3L3 701 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 CACNA1FO60840 1977 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 NMT2O60551 498 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 FGFR4P22455 802 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 PDE6CP51160 858 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 FAM83BQ5T0W9 1011 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 MREGQ8N565 214 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 MRRFQ96E11 262 aaKnown RBP16.8■□□□□ 0.28
PDE4C-211ENST00000597360 VCXQ9H320 206 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 C2CD2Q9Y426 696 aa16.8■□□□□ 0.28
PDE4C-211ENST00000597360 SPDYE5A6NIY4 337 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 PDXDC1Q6P996 788 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 TMEM60Q9H2L4 133 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 CETN3O15182 167 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 SCG2P13521 617 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 STX2P32856 288 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 INHBEP58166 350 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 ICA1Q05084 483 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 SETDB1Q15047 1291 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 ERMARDQ5T6L9 678 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 GIMAP8Q8ND71 665 aaPredicted RBP16.79■□□□□ 0.28
PDE4C-211ENST00000597360 GLG1Q92896 1179 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 NUDCD1Q96RS6 583 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 ROBO1Q9Y6N7 1651 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 TSPY2A6NKD2 308 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 CCNT1O60563 726 aaKnown RBP16.79■□□□□ 0.28
PDE4C-211ENST00000597360 FERP16591 822 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 RFC5P40937 340 aa16.79■□□□□ 0.28
PDE4C-211ENST00000597360 RAB27AP51159 221 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms