RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
SMCO4-206ENST00000596676 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
SMCO4-206ENST00000596676 TCF7P36402 384 aaPredicted RBP17.5■□□□□ 0.39
SMCO4-206ENST00000596676 PSMC6P62333 389 aa17.5■□□□□ 0.39
SMCO4-206ENST00000596676 ATP2C1P98194 919 aaPredicted RBP17.5■□□□□ 0.39
SMCO4-206ENST00000596676 NCAPH2Q6IBW4 605 aa17.5■□□□□ 0.39
SMCO4-206ENST00000596676 ABHD15Q6UXT9 468 aa17.5■□□□□ 0.39
SMCO4-206ENST00000596676 RNF180Q86T96 592 aa17.5■□□□□ 0.39
SMCO4-206ENST00000596676 GIMAP8Q8ND71 665 aaPredicted RBP17.5■□□□□ 0.39
SMCO4-206ENST00000596676 SEPT1Q8WYJ6 367 aa17.5■□□□□ 0.39
SMCO4-206ENST00000596676 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
SMCO4-206ENST00000596676 ELP1O95163 1332 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 POTEMA6NI47 508 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 CST5P28325 142 aaPredicted RBP17.49■□□□□ 0.39
SMCO4-206ENST00000596676 CPT1AP50416 773 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 ACLYP53396 1101 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 CHMP4BP1P59074 171 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 ORC2Q13416 577 aaPredicted RBP17.49■□□□□ 0.39
SMCO4-206ENST00000596676 UGCGQ16739 394 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 ARRDC4Q8NCT1 418 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 KAT2BQ92831 832 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 CHMP5Q9NZZ3 219 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 PCDHA12Q9UN75 941 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 TCHHQ07283 1943 aa17.49■□□□□ 0.39
SMCO4-206ENST00000596676 PP2D1A8MPX8 630 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 ATG7O95352 703 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 LGALS2P05162 132 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 SUPT20HL2P0C7V6 817 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 CDC25AP30304 524 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 NASPP49321 788 aaPredicted RBP17.48■□□□□ 0.39
SMCO4-206ENST00000596676 PURAQ00577 322 aaKnown RBP17.48■□□□□ 0.39
SMCO4-206ENST00000596676 KRT76Q01546 638 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 ZNF746Q6NUN9 644 aaPredicted RBP17.48■□□□□ 0.39
SMCO4-206ENST00000596676 SWSAP1Q6NVH7 229 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 MIER3Q7Z3K6 550 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 CCDC60Q8IWA6 550 aaPredicted RBP17.48■□□□□ 0.39
SMCO4-206ENST00000596676 PAWRQ96IZ0 340 aaKnown RBP17.48■□□□□ 0.39
SMCO4-206ENST00000596676 ZNF396Q96N95 335 aaPredicted RBP17.48■□□□□ 0.39
SMCO4-206ENST00000596676 CLIC6Q96NY7 704 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 C16orf70Q9BSU1 422 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 DISC1Q9NRI5 854 aa17.48■□□□□ 0.39
SMCO4-206ENST00000596676 CIZ1Q9ULV3 898 aaPredicted RBP17.48■□□□□ 0.39
SMCO4-206ENST00000596676 A0A087WWV3 80 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 VWA3AA6NCI4 1184 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 KBTBD13C9JR72 458 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 RBAK-RBAKDNI3L0D1 243 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 DNM1LO00429 736 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 HOXD8P13378 290 aaPredicted RBP17.47■□□□□ 0.39
SMCO4-206ENST00000596676 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
SMCO4-206ENST00000596676 ATP4AP20648 1035 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 MARK3P27448 753 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 SLC39A14Q15043 492 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 DGKDQ16760 1214 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 TRMT1LQ7Z2T5 733 aaKnown RBP17.47■□□□□ 0.39
SMCO4-206ENST00000596676 LINC00301Q8NCQ3 95 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 RGL1Q9NZL6 768 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 PHF24Q9UPV7 400 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 SAMM50Q9Y512 469 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 GRIN2DO15399 1336 aa17.47■□□□□ 0.39
SMCO4-206ENST00000596676 IGKV6D-21A0A0A0MT36 114 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 A0A1W2PQ45 241 aaPredicted RBP17.46■□□□□ 0.39
SMCO4-206ENST00000596676 A0A1W2PQY0 241 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 WDR64B1ANS9 1081 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 PPFIA4O75335 1185 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 LGR5O75473 907 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 STK38Q15208 465 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 SPECC1Q5M775 1068 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 BANK1Q8NDB2 785 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 DYDC2Q96IM9 177 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 SENP6Q9GZR1 1112 aaPredicted RBP17.46■□□□□ 0.39
SMCO4-206ENST00000596676 RNPEPQ9H4A4 650 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 POLR3EQ9NVU0 708 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 WRAP73Q9P2S5 460 aaPredicted RBP17.46■□□□□ 0.39
SMCO4-206ENST00000596676 GABBR1Q9UBS5 961 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 FBXO2Q9UK22 296 aaPredicted RBP17.46■□□□□ 0.39
SMCO4-206ENST00000596676 WDR81Q562E7 1941 aa17.46■□□□□ 0.39
SMCO4-206ENST00000596676 BACH1O14867 736 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 ZNF862O60290 1169 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 ZEB2O60315 1214 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 PRPHP41219 470 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 PSEN2P49810 448 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMCO4-206ENST00000596676 ATN1P54259 1190 aaPredicted RBP17.45■□□□□ 0.38
SMCO4-206ENST00000596676 CYP4A11Q02928 519 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 CTTNQ14247 550 aaKnown RBP17.45■□□□□ 0.38
SMCO4-206ENST00000596676 HIC1Q14526 733 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 MIS18BP1Q6P0N0 1132 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 USP49Q70CQ1 688 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 PCSK9Q8NBP7 692 aaKnown RBP17.45■□□□□ 0.38
SMCO4-206ENST00000596676 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
SMCO4-206ENST00000596676 VTI1AQ96AJ9 217 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 EIF2AK1Q9BQI3 630 aaKnown RBP17.45■□□□□ 0.38
SMCO4-206ENST00000596676 TSEN34Q9BSV6 310 aaKnown RBP17.45■□□□□ 0.38
SMCO4-206ENST00000596676 MTG1Q9BT17 334 aaPredicted RBP17.45■□□□□ 0.38
SMCO4-206ENST00000596676 CEP131Q9UPN4 1083 aa17.45■□□□□ 0.38
SMCO4-206ENST00000596676 PCDHA10Q9Y5I2 948 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms